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These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
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Maintaining the native prairie lands of the Northern Great Plains (NGP), which provide an important habitat for declining grassland species, requires anticipating the effects of increasing atmospheric carbon dioxide (CO2) concentrations and climate change on the region’s vegetation. Specifically, climate change threatens NGP grasslands by increasing the potential encroachment of native woody species into areas where they were previously only present in minor numbers. This project used a dynamic vegetation model to simulate vegetation type (grassland, shrubland, woodland, and forest) for the NGP for a range of projected future climates and relevant management scenarios. Comparing results of these simulations illustrates...
The U.S. Army Corps of Engineers' Upper Mississippi River Restoration (UMRR) program, through its Long Term Resource Monitoring (LTRM) element, collected aerial imagery of the systemic Upper Mississippi River System (UMRS).
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The U.S. Army Corps of Engineers' Upper Mississippi River Restoration (UMRR) program, through its Long Term Resource Monitoring (LTRM) element, collected aerial imagery of the systemic Upper Mississippi River System (UMRS) during the summer of 2020. A Land Cover/Land Use (LCU) spatial database was developed based on the 2020 aerial imagery, which adds a fourth systemic-wide database to the existing 1989, 2000, and 2010/11 LCU databases. While a crosswalk was used to update the 1989 LCU database (originally developed using a different classification system), the 2000, 2010/11, and 2020 LCU databases share the same classification, making them directly comparable from a classification standpoint. Furthermore, protocols...
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Native Cutthroat Trout Oncorhynchus clarkii spp. populations in the western U.S. have declined in part due to displacement by nonnative trout, but mechanisms to explain displacement vary by species and geography. Using a production framework, we demonstrated allopatric populations of Rio Grande Cutthroat Trout O. c. virginalis (RGCT) exhibited consistently higher biomass and secondary production rates (0.19–0.92 g DM·m-2·yr-1) than sympatric populations with Brown Trout Salmo trutta (0.01–0.05 g DM·m-2·yr-1) and that an interactive temperature effect on RGCT biomass and production was overshadowed by the presence of Brown Trout across cold and warm streams. Interestingly, over half of trout production was fueled...
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Physical and chemical changes affect the biota within urban streams at varying scales ranging from individual organisms to populations and communities creating complex interactions that present challenges for characterizing and monitoring the impact on species utilizing these freshwater habitats. Salmonids, specifically cutthroat trout (Oncorhynchus clarkii) and coho salmon (Oncorhynchus kisutch), extensively utilize small stream habitats influenced by a changing urban landscape. This study used a comprehensive fish health assessment concurrent with the U.S. Geological Survey’s Pacific Northwest Stream Quality Assessment in 2015 to quantifiy impacts from disease in juvenile coho and cutthroat salmon, impacts to...
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Benthic diatom assemblages are known to be indicative of water quality but have yet to be widely adopted in biological assessments in the United States due to several limitations. Our goal was to address some of these limitations by developing regional multi-metric indices (MMIs) that are robust to inter-laboratory taxonomic inconsistency, adjusted for natural covariates, and sensitive to a wide range of anthropogenic stressors. We aggregated bioassessment data from two national-scale federal programs and used a data-driven analysis in which all-possible combinations of 2-7 metrics were compared for three measures of performance. The datasets in this release support the Carlisle, et al. 2022 report cited herein....
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A total of 27 temperature sensors were deployed along the lower 90 miles of the Yakima River at 7 locations where cold water had been previously observed. These 7 cold-water areas had 3 to 6 temperature sensors installed to document the extent and duration of these cold-water areas and their impacts on mainstem temperatures of the Lower Yakima River. Cold-water areas included the mouths of tributaries, alongside channels, and within alcoves. Sensor deployments ranged from 1 to 2 years beginning in October 2018. All temperature data are included in the Yakima.temperatures.zip folder. Details of each monitoring location are provided in the site.locs.csv file. In addition to the raw data and site location information,...
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The Best Management Practices Statistical Estimator (BMPSE) was developed by the U.S. Geological Survey (USGS), in cooperation with the Federal Highway Administration (FHWA) Office of Project Delivery and Environmental Review to provide planning-level information about the performance of structural best management practices for decision makers, planners, and highway engineers to assess and mitigate possible adverse effects of highway and urban runoff on the Nation's receiving waters (Granato 2013, 2014; Granato and others, 2021a,b). The BMPSE was used to calculate statistics and create input files for fitting the trapezoidal distribution to data from studies documenting the performance of individual structural stormwater...
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Water surface elevations within seven Willamette River off-channel features (OCF; alcoves and side channels) were measured using submerged pressure transducers. Transducers were installed from late May through mid-October, 2016, when discharge of the Willamette River was between approximately 5,500 and 45,000 cubic feet per second at Salem, Oregon (USGS gage 14191000) and 3,500 to 17,500 cubic feet per second at Harrisburg, Oregon (USGS gage 14166000). Pressure transducer sensor depth was measured at all seven sites. For five of the sites, pressure transducer sensor depths were converted to water surface elevations by surveying the water surface at each transducer with a real-time kinematic global positioning system...
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In support of U.S. Geological Survey invasive carp research examining aggregations of invasive carp in the tail water of dams, water velocity measurements were made at cross sections in the Illinois River below Starved Rock Lock and Dam on June 16, 2021. A total of 16 cross sections were surveyed, with two transects per cross section. Water depth and crew safety limited the extent of the survey. The discharge in the Illinois River at Starved Rock Lock and Dam at the time of data collection was approximately 185.7 cubic meters per second. The data were processed in the Velocity Mapping Toolbox (VMT) v.4.09 (Parsons and others, 2013) to obtain a depth-averaged velocity field for each cross section from paired transects...
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To determine if invasive annual grasses increased around energy developments after the construction phase, we calculated an invasives index using Landsat TM and ETM+ imagery for a 34-year time period (1985-2018) and assessed trends for 1,755 wind turbines (from the U.S. Wind Turbine Database) installed between 1988 and 2013 in the southern California desert. The index uses the maximum normalized difference vegetation index (NDVI) for early season greenness (January-June), and mean NDVI (July-October) for the later dry season. We estimated the relative cover of invasive annuals each year at turbine locations and control sites and tested for changes before and after each turbine was installed. These data were used...
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The data herein are geochemical (from X-Ray fluorescence spectrometry), grain size (percent clay, silt, sand), lithological (loss on ignition data), bathymetric, reconstructed IVT, and radioactive isotopes (14-C, 210-Pb, 226-Ra, and 137-Cs). These data were collected from sediments from Leonard Lake, Mendocino County, California, USA starting in 2014. Together, these data provide evidence for a record of extreme precipitation going back three millennia, showing regional pluvial and drought cycles.
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In 2015, the second of several Regional Stream Quality Assessments (RSQA) was done in the southeastern United States. The Southeast Stream Quality Assessment (SESQA) was a study by the U.S. Geological Survey (USGS) National Water Quality Assessment (NAWQA) project. One of the objectives of the RSQA, and thus the SESQA, is to characterize the relationships between water-quality stressors and stream ecology and subsequently determine the relative effects of these stressors on aquatic biota within the streams (Van Metre and Journey, 2014). To meet this objective, a framework of fundamental geospatial data was required to develop physical and anthropogenic characteristics of the study region, sampled sites and corresponding...
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Plot-level field data were collected in the summer of 2014 to estimate aboveground and belowground biomass in the Great Dismal Swamp National Wildlife Refuge and Dismal Swamp State Park in North Carolina and Virginia. Data were collected at 85 plots. The location of the center of each plot was recorded with a Trimble ProXH global positioning system (GPS) and differentially corrected. Data files included 1: GDS_plots.csv, 2. GDS_FWD.csv, 3. GDS_LWD.csv, 4. GDS_Shrubs.csv, 5. GDS_Trees.csv, and 6. GDS_plot_summaries.csv. The data contained in GDS_plot_summaries.csv were calculated from the GDS_plots.csv, GDS_FWD.csv, GDS_LWD.csv, GDS_Shrubs.csv, GDS_Trees.csv files using the R statistical software environment (R Core...
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Benthic invertebrate communities are monitored because the composition of those communities can affect and be affected by the water quality of an aquatic system. Benthic communities use and sometimes regulate the cycling of essential elements (for example, carbon). Benthic invertebrate taxa may also indicate acute and chronic stressors in an environment because they accumulate contaminants and can respond – sometimes dramatically - to oligotrophic and eutrophic conditions. Benthic communities affect water quality by grazing pelagic food resources and increasing the rate of nutrient regeneration through feeding and bioturbating sediments. South San Francisco Bay is a system dependent on phytoplankton as the base...
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This data release contains three 10-meter resolution GeoTIFFs representing 10-meter (35-foot), 30-meter (100-foot) and 90-meter (300-foot) riparian buffer zones along shorelines, rivers, streams, and other lotic (flowing) water features. The layers are binary, where the value of each cell represents the presence or absence of the buffer zone. In addition, the data release contains shapefile layers that document the extent of corrections that were made to the data to address errors in the stream network (see processing steps section for more details). The methodology combines various fine-scale input layers, including a 1:24k stream network and Chesapeake Bay 1-meter resolution Land Use/Land Cover to approximate...
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Ecological assessment data from the USGS National Water-Quality Assessment Program and the USEPA National River and Stream Assessment were reviewed and records were retained from sampling sites co-located with active USGS stream gages. A limited amount of ancillary data, including location, physical watershed features, and basic water chemistry data for each site were also retained.
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To support an investigation of the effectiveness of a large-scale river restoration project, several types of field data were collected from two gravel-bed reaches of the regulated lower Merced River in California's Central Valley, primarily in the fall of 2016. These data sets were intended to characterize salmon spawning habitat and identify factors influencing spawning site selection. This parent data release includes links to child pages for the following data sets: 1) Bulk samples of streambed sediment used to characterize the subsurface grain size distribution. 2) Pebble counts used to characterize the sediment grain size distribution of the bed surface. 3) Force gage measurements used to parameterize a...
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Coastal wetlands are major global carbon sinks, however, they are heterogeneous and dynamic ecosystems. To characterize spatial and temporal variability in a New England salt marsh, static chamber measurements of greenhouse gas (GHG) fluxes were compared among major plant-defined zones (high marsh dominated by Distichlis spicata and a zone of invasive Phragmites australis) during 2013 and 2014 growing seasons. Two sediment cores were collected in 2015 from the Phragmites zone to support previously reported core collections from the high marsh sites (Gonneea and others 2018). Collected cores were up to 70 cm in length with dry bulk density ranges from 0.04 to 0.33 grams per cubic centimeter and carbon content 22.4%...
map background search result map search result map Projecting the Future Encroachment of Woody Vegetation into Grasslands of the Northern Great Plains by Simulating Climate Conditions and Possible Management Actions Imagery Water surface elevations recorded by submerged water level loggers in off-channel features of the middle and upper Willamette River, Oregon, Summer, 2016 Geospatial database of the study boundary, sampled sites, watersheds, and riparian zones for U.S. Geological Survey Southeast Stream Quality Assessment Matched ecological assessment and stream gaging data for the CONUS Evaluating Coho Salmon in Streams Across an Urbanization Gradient—Part 1, Growth Potential Based on Environmental Factors and Bioenergetics Benthic Community Dynamics in Coyote Creek and Artesian Slough, Southern San Francisco Bay, California, May 2016 to March 2018 Field measurements for characterizing salmon spawning habitat in two restored reaches of the lower Merced River, California Great Dismal Swamp field measurements for aboveground and belowground biomass Data supporting Landsat time series assessment of invasive annual grasses following energy development Best Management Practices Statistical Estimator (BMPSE) Version 1.2.0 Effects of Non-native Brown Trout and Temperature on the Production of Rio Grande Cutthroat Trout Populations Temperature data collected from the Lower Yakima River from October 2018 to October 2020 UMRR LTRM 2020 4-Band Aerial Imagery Mosaic - Mississippi River Pool 13 Data Release for: A Web-Based Tool for Assessing the Condition of Benthic Diatom Assemblages in Streams and Rivers of the Conterminous United States Static chamber gas fluxes and carbon and nitrogen isotope content of age-dated sediment cores from a Phragmites wetland in Sage Lot Pond, Massachusetts, 2013-2015 Chesapeake Bay Watershed 1:24k 10, 30 and 90-meter Riparian Buffer Zones Velocity Survey at Cross Sections in the Illinois River below Starved Rock Lock and Dam near Utica, Illinois, June 16, 2021 Captures and Trapping Effort for Deer Mice (Peromyscus sonoriensis) at Point Reyes National Seashore, California, USA from 2021 to 2022 Geochemical, grain size, lithological, bathymetric, reconstructed integrated vapor transport, and age model data for Leonard Lake, Mendocino County Static chamber gas fluxes and carbon and nitrogen isotope content of age-dated sediment cores from a Phragmites wetland in Sage Lot Pond, Massachusetts, 2013-2015 Velocity Survey at Cross Sections in the Illinois River below Starved Rock Lock and Dam near Utica, Illinois, June 16, 2021 Benthic Community Dynamics in Coyote Creek and Artesian Slough, Southern San Francisco Bay, California, May 2016 to March 2018 Field measurements for characterizing salmon spawning habitat in two restored reaches of the lower Merced River, California Great Dismal Swamp field measurements for aboveground and belowground biomass Captures and Trapping Effort for Deer Mice (Peromyscus sonoriensis) at Point Reyes National Seashore, California, USA from 2021 to 2022 UMRR LTRM 2020 4-Band Aerial Imagery Mosaic - Mississippi River Pool 13 Geochemical, grain size, lithological, bathymetric, reconstructed integrated vapor transport, and age model data for Leonard Lake, Mendocino County Effects of Non-native Brown Trout and Temperature on the Production of Rio Grande Cutthroat Trout Populations Evaluating Coho Salmon in Streams Across an Urbanization Gradient—Part 1, Growth Potential Based on Environmental Factors and Bioenergetics Data supporting Landsat time series assessment of invasive annual grasses following energy development Chesapeake Bay Watershed 1:24k 10, 30 and 90-meter Riparian Buffer Zones Geospatial database of the study boundary, sampled sites, watersheds, and riparian zones for U.S. Geological Survey Southeast Stream Quality Assessment Imagery Projecting the Future Encroachment of Woody Vegetation into Grasslands of the Northern Great Plains by Simulating Climate Conditions and Possible Management Actions Matched ecological assessment and stream gaging data for the CONUS Data Release for: A Web-Based Tool for Assessing the Condition of Benthic Diatom Assemblages in Streams and Rivers of the Conterminous United States Best Management Practices Statistical Estimator (BMPSE) Version 1.2.0