Filters: partyWithName: Ecosystems (X) > partyWithName: Western Ecological Research Center (X)
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This dataset describes mesopredator locations (raccoons and striped skunks), dabbling duck nest locations (mallard, gadwall, and cinnamon teal), northern harrier nest locations, and random locations in relation to a set of habitat features in Suisun Marsh, California during 2016 through 2019. We designed a series of questions to link fine-scale predator movements and vulnerability of dabbling duck nests to predator encounters and egg predation. We conducted our study over a 4-year period using 41 GPS-collared raccoons and striped skunks, two of the most widespread mammalian predators of waterfowl eggs in North America, and more than 2000 monitored duck nests. Each night of movement for mesopredators contains the...
Categories: Data;
Tags: California,
Suisun Marsh,
USGS Science Data Catalog (SDC),
Wildlife Biology,
animal behavior,
These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: California,
Ecology,
Marin County,
Point Reyes National Seashore,
USGS Science Data Catalog (SDC),
We used free-ranging northern elephant seals as a model species to investigate maternal transfer of mercury (Hg) to pups in relation to maternal traits, including maternal blood mercury concentrations, and to quantify the links between pup lanugo mercury concentrations and maternal mesopelagic foraging behavior during gestation. We satellite tracked known-age adult females at sea during their seven-month-long foraging trip to determine maternal foraging strategies (geographic locations and diving depths) and quantified mercury concentrations in maternal blood and their pups’ blood and lanugo (which is defined as pup hair grown in utero) early in lactation when seals were hauled out. We then tested how the maternal...
Categories: Data;
Tags: Ecology,
Environmental Health,
Marine Oceanic Mesopelagic Layer,
USGS Science Data Catalog (SDC),
Wildlife Biology,
These data represent an annotated training data for machine learned life history classification of the daily activity of dabbling ducks (f. Anatidae sf. Anatinae) using hourly GPS data. Each row of data represents a single GPS location for one of 5 species of dabbling duck. Note: the machine learned model was developed to be general across sf. Anatinae and does not include specific reference to the species included. That information is obtainable from the point of contact upon request. Each data record contains unique identifiers for individual bird, individual date of locations for an individual bird, and for individual location. Each record contains spatial, temporal and associated habitat information. Each record...
Categories: Data;
Tags: Ecology,
GPS measurement,
Modified Normalized Difference Water Index,
North America,
USGS Science Data Catalog (SDC),
These datasets were developed to represent the geographic distribution of Plantago ovata in the Mojave Desert. This data release consists of two raster spatial layers (GeoTIFF) reflecting predicted habitat for the species within the Mojave Desert and the standard error in predictions. The habitat layer (raster dataset) is a continuous probability distribution of suitable habitat where values range from 0 (very low probability of species occurrence) to 1 (very high probability of species occurrence). An additional raster dataset provides the standard error in habitat predictions calculated among alternative habitat models: users should evaluate both the habitat and standard error datasets and exercise prudence when...
We used a hierarchical Bayesian modeling framework to estimate resource selection functions and survival for early and late brood-rearing stages of sage-grouse in relation to a broad suite of habitat characteristics evaluated at multiple spatial scales within the Great Basin from 2009 to 2019. Sage-grouse selected for greater perennial grass cover, higher relative elevations, and areas closer to springs and wet meadows during both early and late brood-rearing. Terrain characteristics, including heat load and aspect, were important in survival models, as was variation in shrub height. We also found strong evidence for higher survival for both early and late broods within previously burned areas, but survival within...
Preserving native species diversity is fundamental to ecosystem conservation. Selecting appropriate native species for use in restoration is a critical component of project design and may emphasize species attributes such as life history, functional type, pollinator services, and nutritional value for wildlife. Determining which species are likely to establish and persist in a particular environment is a key consideration. Species distribution models (SDMs) characterize relationships between species occurrences and the physical environment (e.g., climate, soil, topographic relief) and provide a mechanism for assessing which species may successfully propagate at a restoration site. In conjunction with information...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
California,
Mojave,
Nevada,
Utah,
Preserving native species diversity is fundamental to ecosystem conservation. Selecting appropriate native species for use in restoration is a critical component of project design and may emphasize species attributes such as life history, functional type, pollinator services, and nutritional value for wildlife. Determining which species are likely to establish and persist in a particular environment is a key consideration. Species distribution models (SDMs) characterize relationships between species occurrences and the physical environment (e.g., climate, soil, topographic relief) and provide a mechanism for assessing which species may successfully propagate at a restoration site. In conjunction with information...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
California,
Mojave,
Nevada,
Utah,
Preserving native species diversity is fundamental to ecosystem conservation. Selecting appropriate native species for use in restoration is a critical component of project design and may emphasize species attributes such as life history, functional type, pollinator services, and nutritional value for wildlife. Determining which species are likely to establish and persist in a particular environment is a key consideration. Species distribution models (SDMs) characterize relationships between species occurrences and the physical environment (e.g., climate, soil, topographic relief) and provide a mechanism for assessing which species may successfully propagate at a restoration site. In conjunction with information...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
California,
Mojave,
Nevada,
Utah,
This dataset contains mercury concentrations and locations of wintering red-legged kittiwakes in the western subartic Pacific Ocean. These data support the following publication: Fleishman, AB, RA Orben, N Kokubun, A Will, R Paredes, JT Ackerman, A Takahashi, AS Kitaysky, and SA Shaffer. 2019. Wintering in the Western Subarctic Pacific increases mercury contamination of red-legged kittiwakes. Environmental Science and Technology, in press.
Categories: Data;
Tags: Pacific Ocean,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biogeography,
biota,
Accurate elevation data in coastal wetlands is crucial for planning for sea-level rise. Elevation surveys were conducted across southwest Florida wetlands to provide ground validation of LiDAR as well as target long-term monitoring stations (surface elevation tables). Surveys were conducted in June 2021 across Ding Darling National Wildlife Refuge, Clam Bay, Rookery Bay National Estuarine Research Reserve, and Ten Thousand Islands National Wildlife Refuge. A combination of post-processed kinematic GPS and differential levelling survey techniques were employed, depending on the canopy cover.
Categories: Data;
Tags: Clam Bay,
Ding Darling National Wildlife Refuge,
Florida,
GPS measurement,
RTK GPS,
The dataset consists of two csv files one for adult snakes and one for captive-reared juvenile snakes. The data contains start times (when snakes entered the study) and end times (when snakes died or were censored from the study) for survival analysis. The data also contains general information about the individual snakes (id, snout-vent length, treatment group, whether or not they were translocated), sex (juveniles only since adults were all female), surface activity (and data needed to calculate surface activity), and average distance moved between telemetry resighting. The above information was used as covariates in the survival models. These data support the following publication: Nguyen, A.M., Todd, B.D....
Categories: Data;
Tags: California,
Ecology,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
Data presented are results of vegetation sampling conducted in 2019-20 and 2023 in 24 survey plots to document the status of infestation by shot hole borers (Euwallacea sp.) on the riparian vegetation at the San Diego River. This dataset presents location, percent cover of different vegetation types, and number of seedlings for each survey plot. In addition, for each tree and sapling in each plot we present species, size, tree status (live, resprouting, recently dead from shot hole borer, or dead from another cause or unknown cause), infestation status (infested by shot hole borer, not infested by shot hole borer, or infestation not confirmed as shot hole borer), and crown condition. For every tree we also present...
One CSV file with data from basic field surveys of southern sea otters at five sites in California, USA, including (from north to south) Elkhorn Slough, Monterey, Big Sur, Piedras Blancas, and San Luis Obispo, are provided. These are the data used to fit models in Law et al. 2024 (full citation in the larger work) publication in Science. The data consist of otter age, sex, and size morphometrics, measured from sea otter captures; associated forage information collected by visual surveys; and hardness of forage prey species. Complete description of the study objectives, methods, field sites, and uses of these data for analyses and interpretations can be found in Law et al. 2024. Although it is well documented that...
Digital elevation model outputs from wetland accreting rate model of ecosystem resilience (WARMER) at ten year intervals from 2010-2110. Baseline elevations were collected with RTK GPS units and LiDAR elevations in non-surveyed areas were also corrected using LEAN method. Historical accretion rates were collected at each salt marsh and used to parameterize WARMER, predicting future elevations. These data support the following publication: Rosencranz JA, Thorne KM, Buffington KJ, et al. Sea‐level rise, habitat loss, and potential extirpation of a salt marsh specialist bird in urbanized landscapes. Ecol Evol. 2018;00:1–11. https://doi.org/10.1002/ece3.4196
Types: Citation;
Tags: California,
Carpinteria,
Mugu Lagoon,
Remote Sensing,
Seal Beach National Wildlife Refuge,
This data release is comprised of tidal marsh biomass data and spatial predictions of peak biomass and Julian day of peak biomass using data from the Landsat archive. Aboveground biomass dry weight of mixed-species plots (25x50 cm) at a tidal marsh in Willapa Bay, Washington were used to establish a relationship between biomass and tasseled cap greeness (TCG). The julian day of annual peak greenness and the value of annual peak greenness for 32 years at Bandon National Wildlife Refuge (NWR), Grays Harbor NWR, and Nisqually NWR was calculated by fitting a Gaussian function to the TCG values for a given year. The value of each 30 meter pixel is the Julian day of maximum predicted TCG or the maximum predicted TCG....
The GIS shapefile Extra limit counts of southern sea otters 2019 is a point layer representing the locations of sea otter sightings that fall outside the officially recognized range of the southern sea otter (Enhydra lutris nereis) in mainland California. These data were collected during the spring 2019 range-wide census. The USGS range-wide sea otter census has been undertaken each year since 1982, using consistent methodology involving both ground-based and aerial-based counts. The spring census provides the primary basis for gauging population trends by State and Federal management agencies. Sea otter distribution in California (the mainland range) is considered to comprise a band of potential habitat stretching...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: California,
Central California Coastal,
Southern California Coastal,
aerial counts,
biogeography,
The current study was designed to provide critical information for resource managers (specifically the Bureau of Ocean Energy Management, henceforth BOEM, and the U.S. Fish and Wildlife Service, henceforth USFWS) about the spatial ecology, population status, and potential population threats to sea otters in Santa Barbara Channel, with particular reference to exposure to manmade structures and sources of oil and natural gas. Our four primary research objectives were: 1. Determine the extent of movements and spatial use patterns by sea otters along the southern California coast 2. Identify important sea otter resting and foraging areas adjacent to manmade structures 3. Assess sea otter distribution, behavior and...
This U.S. Geological Survey Data Release contains the data and metadata associated with the journal article. Parental incubation behavior largely influences nest survival, a critical demographic process in avian population dynamics, and behaviors vary across species with different life history breeding strategies. Although research has identified nest survival advantages of mixing colonies, behavioral mechanisms that might explain these effects is largely lacking. We examined parental incubation behavior using video-monitoring techniques on Alcatraz Island, California, of black-crowned night-heron Nycticorax nycticorax (hereinafter, night-heron) in a mixed-species colony with California gulls Larus californicus...
Physical site characteristics including aspect, elevation, and slope were recorded for each study plot and spatial coordinates were obtained from a global positioning system. Stand height was determined by averaging the heights of the first live woody individual encountered along each 10 m subplot in mechanically masticated plots as well as in the adjacent controls. Unfortunately height data was not collected from postfire plots in the prior study. The age of the stand prior to each mechanical disturbance was obtained from stem samples collected from the first two obligate seeding individuals encountered within controls and ranged from seven to sixty-four years across all mechanically masticated fuel treatments....
Categories: Data;
Types: Citation;
Tags: Angeles National Forest,
Cleveland National Forest,
Los Padres National Forest,
San Bernardino National Forest,
chaparral,
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