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This data set includes geospatial data and tables providing location, environmental, and vegetation data collected in 2017 and 2018 at the Little Saint Francis River (LSFR) chat pile restoration site, Fredericktown, Madison County, Missouri. Restoration actions are being implemeneted as part of the settlement for the Madison County Mines Superfund site to compensate the public for losses of natural resources and the services they provide as part of the Natural Resource Damage Assessment and Restoration Southeast Missouri Lead Mining District case. Data were collected prior to and during the early stages of restoration actions to restore bottomland forest habitat, reduce invasive plant species abundance, and improve...
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Semi-Permeable Membrane Devices (SPMDs) were deployed for approximately 2 weeks at Palmyra Atoll during October and November, 2008. SPMDs passively accumulate organic compounds from the aquatic enviroment, and are then analyzed for various organic compounds. The deployment date, reasons for selecting the particular site, and photograph numbers as links are indicated.
Within large-river ecosystems, floodplains serve a variety of important ecological functions. A recent survey of 80 managers of floodplain conservation lands along the Upper and Middle Mississippi and Lower Missouri Rivers in the central United States found that the most critical information needed to improve floodplain management centered on metrics for characterizing depth, extent, frequency, duration, and timing of inundation. These metrics can be delivered to managers efficiently through cloud-based interactive maps. To calculate these metrics, we interpolated an existing one-dimensional HEC-RAS hydraulic model for the Middle Mississippi River, which simulated water surface elevations at cross sections spaced...
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We developed an age-structured population matrix model to perform population viability analysis for Lower Missouri River (LMR) shovelnose sturgeon (Scaphirhynchus platorynchus). We investigated potential effects of the commercial fishing moratorium put in place to help protect the similar-appearing pallid sturgeon (S. albus). The model applies different components of total variance in life history parameters at different levels: sampling variance (parameter uncertainty) between model iterations; temporal variance (temporal environmental fluctuations) between time steps within iterations; and individual variance (individual differences) within each time-step. The model predicted annual rates of population increase...
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Shapefile created by USGS. Channel transects were constructed to be used in evaluating channel widths and channel width variation. Transects were laid out at 0.1 mile intervals along the navigation channel thalweg. They extend perpendicular to thalweg and intersect the bankfull channel margin, delineated from low-altitude aerial orthophotos provided by the US Army Corps of Engineers, 11/1/2012 to 11/21/2012. The bankfull dimensions were digitized by hand. Each transect was additionally attributed with the USGS bend number, Pallid Sturgeon Population Assessment Program (PSPAP) segment number, and PSPAP bend number.
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Data set contains individual structures and use-areas identifiable from scanned images of 1944 hand-drawn map of buildings and facilities at Palmyra Atoll during World War II, at which time the atoll served as a training facility for the U.S. Navy. Scanned images were georeferenced against control points identifiable from 2007 QuickBird satellite imagery and on control points for which positional data were gathered during sampling in October and November 2008. Georeferenced image was then used to delineate individual structures and other areas as polygons. Attributes were taken from legend for 1944 map.
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Globally, changing fire regimes due to climate is one of the greatest threats to ecosystems and society. This dataset presents projections of historic and future fire probability for the southcentral U.S. using downscaled climate projections and the Physical Chemistry Fire Frequency Model (PC2FM, Guyette et al., 2012). Climate data from 1900-1929 and projected climate data for 2040-2069 and 2070-2099 were used as model inputs to the Physical Chemistry Fire Frequency Model (Guyette et al. 2012) to estimate fire probability. Baseline and future time period data are from three global climate models (GCMs): CGCM, GFDL, and HadCM3. The nine associated data sets (tiffs) represent estimated change in mean fire probability...
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Macrhybopsis reproduction and propagule traits were studied in the laboratory using two temperature regimes and three hormone treatments and which methods produced the most spawns. Only sicklefin chub (M. meeki) spawned successfully although sturgeon chub (M. gelida) released unfertilized eggs. All temperature and hormone treatments produced M. meeki spawns, but two treatments had similar success rates at 44 and 43%, consisting of a constant daily temperature with no hormone added, or daily temperature fluctuations with hormone added to the water. Spawns consisted of multiple successful demersal circular swimming spawning embraces interspersed with circular swims without embraces. The most spawns observed for one...
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This data was generated from a study in which five experiments were conducted that tested whether and how dissolved chemicals might assist food recognition in two filter-feeding fishes, the silver (Hypophthalmichthys molitrix) and the bighead carp (H. nobilis). The buccal-pharngeal pumping (BPP), a behavior in which fish pump water into their buccal cavities, was observed in both silver and bighead carps after exposure to a a variety of food filtrates and mixtures. In addition, occlusion experiments to determine if the olfactory sense has a very important, but not exclusive, role in bigheaded carp feeding behaviors were conducted.
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Shapefile created by USGS. This is a polygon created from Landsat TM imagery. All Landsat 4-5 TM images overlapping the Missouri River downstream from Gavins Point Dam were identified and examined for lack of clouds. Usable images were classified into sand, vegetation, and water. Classified images were then merged, and the number of times a given pixel was classified as either sand, vegetation, or water were computed. The presented dataset represents pixels which were classified as sand in greater than 5% of images which were collected during a growing season defined as julian day 116-296 (to preclude vegetated islands, which classify as sand outside of foliation), translated into polygons.
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This child data release includes hyperspectral and RGB images acquired from an Unmanned Aircraft System (UAS) during an experiment performed at the USGS Columbia Environmental Research Center, near Columbia, Missouri, on April 2, 2019. The purpose of the experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) tracer from various types of remotely sensed data in water with varying levels of turbidity. Whereas previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, the Missouri River is much more turbid and the reflectance signal associated with the sediment-laden water could obscure that related to the presence and amount...
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The data provide location and data quality information for ground control points (GCP) deployed at Palmyra Atoll for acquisition of imagery using small unoccupied aerial systems (sUAS) in October 2016. Thales ProMark 3 handheld geographic positioning systems (GPS) were used as both a local base station and to record locations of individual GCPs, with occupancy times of approximately 30 minutes per GCP. Location data for GCPs were post-processed against base station data using Mobile Mapper Office software to yield local position accuracy of approximately 0.1 m.
Within large-river ecosystems, floodplains serve a variety of important ecological functions. A recent survey of 80 managers of floodplain conservation lands along the Upper and Middle Mississippi and Lower Missouri Rivers in the central United States found that the most critical information needed to improve floodplain management centered on metrics for characterizing depth, extent, frequency, duration, and timing of inundation. These metrics can be delivered to managers efficiently through cloud-based interactive maps. To calculate these metrics, we interpolated an existing one-dimensional HEC-RAS hydraulic model for the Middle Mississippi River, which simulated water surface elevations at cross sections spaced...
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Globally, changing fire regimes due to climate is one of the greatest threats to ecosystems and society. This dataset presents projections of historic and future fire probability for the southcentral U.S. using downscaled climate projections and the Physical Chemistry Fire Frequency Model (PC2FM, Guyette et al., 2012). Climate data from 1900-1929 and projected climate data for 2040-2069 and 2070-2099 were used as model inputs to the Physical Chemistry Fire Frequency Model (Guyette et al. 2012) to estimate fire probability. Baseline and future time period data are from three global climate models (GCMs): CGCM, GFDL, and HadCM3. The nine associated data sets (tiffs) represent estimated change in mean fire probability...
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Point clouds, high resolution digital surface models (DSM), and high resolution orthoimagery of Palmyra Atoll, USA, were generated from aerial 3-color and 5-band imagery collected October 2016 using Unoccupied Aerial Systems (UAS, or "drones"). Data were processed in sections corresponsing to flight areas using photogrammetry to generate three-dimensional point clouds (.las) by identifying pixels from multiple images representing the same object and calculating the x, y, and z coordinates of that object/pixel. Point clouds for each section were processed to create DSMs (.tif) representing the continuous surface of the uppermost reflective surface (i.e., data have not been filtered for vegetation classes or height)....
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We measured ontogenetic changes in routine and maximum swimming speeds of bighead, grass, and silver carp larvae. Daily measurements of routine swimming speed were taken for two weeks post-hatch using a still camera and the LARVEL program, a custom image-analysis software. Larval swimming speed was calculated using larval locations in subsequent image frames and time between images. Using an endurance chamber, we determined the maximum swimming speed of larvae (post gas bladder inflation) for four to eight weeks post-hatch.
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Data collected from acute 96-hour and chronic 28-day toxicity tests of Aluminum to a commonly tested unionid mussel (Lampsilis siliquoidea) and a commonly tested amphipod (Hyalella azteca) at a pH of 6 and water hardness of 100 mg/L as CaCO3.
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This dataset includes microsomal EROD data from an assay done with liver samples from several fish species that are found in Arizona at sites that are being assessed for PBDE contamination. The data was created in September and October 2016.
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This child data release includes in situ measurements of turbidity and Rhodamine WT dye concentration acquired during an experiment performed at the USGS Columbia Environmental Research Center, near Columbia, Missouri, on April 2, 2019. The purpose of the experiment was to assess the feasibility of inferring concentrations of a visible dye (Rhodamine WT) tracer from various types of remotely sensed data in water with varying levels of turbidity. Whereas previous research on remote sensing of tracer dye concentrations has focused on clear-flowing streams, the Missouri River is much more turbid and the reflectance signal associated with the sediment-laden water could obscure that related to the presence and amount...
Within large-river ecosystems, floodplains serve a variety of important ecological functions. A recent survey of 80 managers of floodplain conservation lands along the Upper and Middle Mississippi and Lower Missouri Rivers in the central United States found that the most critical information needed to improve floodplain management centered on metrics for characterizing depth, extent, frequency, duration, and timing of inundation. These metrics can be delivered to managers efficiently through cloud-based interactive maps. To calculate these metrics, we interpolated an existing one-dimensional HEC-RAS hydraulic model for the Middle Mississippi River, which simulated water surface elevations at cross sections spaced...
map background search result map search result map Microsomal EROD data of fish liver sample assay from species collected in the Salt and Gila Rivers, Arizona Acute and chronic toxicity of aluminum to a unionid mussel (Lampsilis siliquoidea) and an amphipod (Hyallela azteca) in water-only exposures-Data Reproductive strategy, spawning induction, spawning temperatures and early life history of captive sicklefin chub Macrhybopsis meeki-Data US Navy roads Palmyra Atoll 1944 SPMD samples Palmyra Atoll 2008 Ontogenetic changes in swimming speed of silver carp, bighead carp, and grass carp larvae-Data Chemical cues which include amino acids mediate species-specific feeding behavior in invasive filter-feeding bigheaded carps-Data Bankfull channel transects, Lower Missouri River Persistent sand polygons, Lower Missouri River Fire probability for 1900-1929 using CGCM baseline climate values Fire probability for 1900-1929 using GFDL baseline climate values Fish population model R code Pre-restoration vegetation data, Little Saint Francis River chat pile site, Missouri, USA, 2017 and 2018 Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016 (ver. 1.1, November 2020) Hyperspectral and RGB images acquired during an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 In situ measurements of turbidity and Rhodamine WT dye concentration from an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016-GCPs 2016 No Levee (Altered) Inundation Metrics for the Middle Mississippi River With Levee (baseline) Inundation Metrics for the Middle Mississippi River Base Terrain and Bathymetry for the Middle Mississippi River Hyperspectral and RGB images acquired during an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 In situ measurements of turbidity and Rhodamine WT dye concentration from an experiment conducted at the USGS Columbia Environmental Research Center, Columbia, MO, on April 2, 2019 Pre-restoration vegetation data, Little Saint Francis River chat pile site, Missouri, USA, 2017 and 2018 US Navy roads Palmyra Atoll 1944 Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016-GCPs 2016 SPMD samples Palmyra Atoll 2008 Orthoimagery and elevation data derived from UAS imagery for Palmyra Atoll, USA 2016 (ver. 1.1, November 2020) Base Terrain and Bathymetry for the Middle Mississippi River No Levee (Altered) Inundation Metrics for the Middle Mississippi River With Levee (baseline) Inundation Metrics for the Middle Mississippi River Persistent sand polygons, Lower Missouri River Bankfull channel transects, Lower Missouri River Fire probability for 1900-1929 using GFDL baseline climate values Fire probability for 1900-1929 using CGCM baseline climate values