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This data release includes physical and chemical characteristics of field collected sediment and soil samples in Missouri representing potential sediment/soil that may enter the water column during construction related activities. Three samples were collected, including Spring River sediment, Osage River bank soil and Columbia crushed limestone. The impacts of increased suspended solid level due to the three samples on early-stage freshwater mussels were examined using three freshwater mussel species, including Fatmucket (Lampsilis siliquoidea), Arkansas Brokenray (Lampsilis reeveiana), and Washboard (Megalonaias nervosa). Specifically, toxicity endpoints including survival, biomass, and growth of juveniles were...
Categories: Data;
Tags: Acute toxicity,
Aquatic Biology,
Boone County,
Chronic toxicity,
Osage River,
This dataset contains two- and quasi-three-dimensional hydrodynamic model outputs from the Flow and Sediment Transport with Morphologic Evolution of CHannels (FaSTMECH) hydrodynamic model in the open-source binary Visualization Toolkit (VTK) format (https://vtk.org/). The simulations were run at flows in the range of 185-635 cms at increments of 30 cms. This set of flow conditions pertains to the base lateral eddy viscosity scenario referred to as LEVx1 in Call et al., 2023. Files can be opened using the open-source software program Paraview: (https://www.paraview.org/).
These two datasets contain metrics from hydrodynamic and particle tracking simulations for two sub-reaches of the Upper Missouri River near Wolf Point, MT. The upstream reach is referred to as the “upper” reach while the downstream reach is referred to as the “lower” reach. Simulations were performed for 16 flows in the range of 185-635 cms at increments of 30 cms.
These data are comprised of measurements of elements (e.g., uranium, cobalt, nickel, copper, zinc, cadmium, lead, etc.), major anions (chloride, nitrite+nitrate as nitrogen, sulfate, etc.), organic carbon, and general water quality characteristics in Pinyon Plain Mine containment pond water, invertebrate, vegetation and sediment samples, collected in calendar year 2022.
These data are comprised of measurements of elements (e.g., uranium, cobalt, nickel, copper, zinc, cadmium, lead, etc.) in Pinyon Plain Mine containment pond sediment samples collected in calendar year 2022.
This dataset contains particle starting location files for particle tracking simulations of the Upper Missouri River near Wolf Point, MT using the “Fluvial Particle” particle tracking model (https://doi.org/10.5066/P9K1U4O0). The file “DriftExperiment_StartLocations_n30000.csv” corresponds to particle simulations of a July 1, 2019, larval drift experiment. This file is configured to simulate 30,000 particles run in serial (i.e., 30,000 particles run on a single CPU). The files “ReachComparison_StartLocations_Lower_n250.csv” and “ReachComparison_StartLocations_Upper_n250.csv” correspond to particle simulations comparing the upper and lower sub-reaches of the larger model reach. Each of these simulations also used...
This dataset contains two- and quasi-three-dimensional hydrodynamic model outputs from the Flow and Sediment Transport with Morphologic Evolution of CHannels (FaSTMECH) hydrodynamic model in the open source binary Visualization Toolkit (VTK) format (https://vtk.org/). The simulations were run at 348 cms as measured on July 1, 2019, during a larval drift experiment conducted on the Upper Missouri River near Wolf Point, MT. Three different variations of the model were run at multiples of 0.5, 1, and 2 times the calculated lateral eddy viscosity (LEV) value to account for uncertainty in this parameter. These are labeled as LEVx0p5, LEVx1, and LEVx2 respectively. Files can be opened using the open-source software program...
This dataset contains shapefiles for three longitudinal water surface elevation profiles collected by boat on the Upper Missouri River near Wolf Point, MT between June 2018 and July 2019. The dataset was collected to calibrate a multidimensional hydrodynamic model.
Monitoring of vitamin B1 (thiamine) in the eggs of lake trout (Salvelinus namaycush) collected from lakes Huron and Michigan has been conducted by the U.S. Geological Survey since the mid-1990’s. The results of this monitoring effort have been used by natural resource management agencies and native American tribes within the Great Lakes basin to evaluate the reproductive health of lake trout. The data in this release are the thiamine concentrations measured in lake trout collected from 1996-2018. Results are reported as total thiamine (nmol/g-egg), collection site, lake, year collected, and reference to the analysis methods.
Categories: Data;
Tags: Canada,
EMS,
Early Mortality Syndrome,
Fish,
Fish Spawning and Larval Aggregation,
These data are comprised of measurements of elements (e.g., uranium, cobalt, nickel, copper, zinc, cadmium, lead, etc.) in Pinyon Plain Mine containment pond vegetation samples collected in calendar year 2022.
The dataset contains a hybrid bathymetric-topographic digital elevation model (DEM) of the Upper Missouri River near Wolf Point, MT. The DEM was generated within ArcGIS by compositing bathymetric data from multiple single beam sonar surveys collected between June 2018 and July 2019 with previously existing topographic data collected from airborne LiDAR into a triangulated irregular network (TIN). The resulting TIN was then manually edited and exported as a raster for use in developing a hydrodynamic model.
We tested salinity tolerance of grass carp and silver carp eggs and larvae during two phases of development – pre-gas bladder inflation and post gas bladder inflation to the development of the second gas bladder chamber, using 6 different salinity concentrations ranging from 0 to 36 ppt. Growth and developmental rates were also observed after exposure. After the initiation of horizontal swimming, grass carp larvae were tested in a Y-maze to assess any preferences for salinity levels.
Data includes fish abundance and habitat data collected at ten sites in the Sandusky River, OH. Fish were collected using two 3.67 m long hoop nets with an initial hoop diameter of 0.91 m. Nets were set perpendicular to the current, opening toward the shoreline. Nets were set for approximately 24 hours and catch rates for each set were defined as the number of fish caught in the two hoop nets per 24-hour sampling period. Fish were identified to species, measured for total length (mm), and released. Water quality was taken daily at each site at approximately the same time of day with a YSI Exo2 multiparameter sonde. Physical habitat data was recorded at the start of each trial. Vegetation coverage was characterized...
Categories: Data;
Tags: Aquatic Biology,
Great Lakes,
Sandusky River,
USGS Science Data Catalog (SDC),
biota,
This dataset contains two subsets of animations corresponding to particle tracking simulations of the Upper Missouri River near Wolf Point, MT comparing larval transport through the upper and lower sub-reaches of the larger model reach. Animations do not contain audio and depict particles moving from the top of the reach (left side) to the bottom of the reach (right side). A total of 96 animations are included corresponding to a combination of 1 of both reaches (upper or lower), 1 of 16 discharges (185-635 cms, at increments of 30 cms), and 1 of 3 vertical movement methods (active60pct, active75pct, or passive).
This dataset contains breakthrough curves calculated from particle tracking simulations of a July 1, 2019, larval drift experiment conducted on the Upper Missouri River near Wolf Point, MT. Breakthrough curves were generated using a custom script written in the Python programming language that counts the number of particles per time step passing through sampling locations. Breakthrough curves were generated for particles using passive, active75pct, and active60pct vertical movement methods at the first two sampling stations downstream of the release location.
This dataset contains a series of processed acoustic Doppler current profiler (ADCP) measurements collected by boat on the Upper Missouri River near Wolf Point, Montana between 2018 and 2019. The data presented here have been processed with the Velocity Mapping Toolbox (VMT) and combined into a single shapefile using ArcGIS. The dataset was collected to validate a multidimensional hydrodynamic model.
These data are comprised of measurements of elements (e.g., uranium, cobalt, nickel, copper, zinc, cadmium, lead, etc.), major anions (chloride, nitrite+nitrate as nitrogen, sulfate, etc.), organic carbon, and general water quality parameters in Pinyon Plain Mine containment pond water samples collected in calendar year 2022.
The Kentucky Department of Fish and Wildlife Resources and Tennessee Wildlife Resource Agency conducted observations onboard commercial fishing vessels. During these observations total lengths were collected from a subset of that capture which we have used to develop a length-based stock assessment of invasive carp. The first dataset represent harvest from the invasive carp harvest program in Kentucky and Tennessee from 2009-2021 only in Lake Barkley and Kentucky Lake where the majority of harvest occurs. The second data are length data from a subset of those fish harvested in 2018-2021. The last dataset are the results from a survey delivered to fishers participating in the invasive carp harvest program in Kentucky...
Categories: Data;
Tags: Aquatic Biology,
Fisheries,
Kentucky Lake,
Lake Barkley,
USGS Science Data Catalog (SDC),
Data describe a designed environmental DNA (eDNA) survey for the detection of Spectaclecase (Cumberlandia monodonta, also referred to as Margaritifera monodonta) from field collected water samples. Parameters described include the limit of detection and limit of quantification of the assay; a list of freshwater mussel species tissue samples that were used to test specificity of the assay; and field collected water samples that were tested to detect the presence of Spectaclecase DNA. Samples were collected from sites on the Big Piney River, Missouri from 2020 to 2022.
Categories: Data;
Tags: Big Piney River, Missouri,
USGS Science Data Catalog (SDC),
biota,
environment,
environmental DNA,
This dataset contains processed simulation results and field data of a larval drift experiment conducted on July 1, 2019, on the Upper Missouri River.
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