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Background Deoxyribonucleic acid (DNA) is the hereditary material in organisms that contains the biological instructions for building and maintaining them. The chemical structure of DNA is the same for all organisms, but differences exist in the order of the DNA building blocks, known as base pairs. Unique sequences provide a means to identify individual species and detect their presence within aquatic or terrestrial environments. Environmental DNA (eDNA) is nuclear or mitochondrial DNA that is shed from an organism into the environment. Sources of eDNA include feces, mucous, and gametes; shed skin; and carcasses. In aquatic environments, eDNA is diluted and distributed by currents and other hydrological processes....
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Background Heavy metals, phosphorus, and organic contaminants in water and sediments of the lower Genesee River, resulted in the designation of fourteen beneficial uses as impaired in the Rochester Embayment Area of Concern (AOC). The benthic macroinvertebrate community or “benthos” Beneficial Use Impairment (BUI) was designated as degraded in the Genesee River because the New York State Department of Environmental Conservation (NYSDEC) impairment metrics generally identified slight to moderate impacts through the 1990s and 2000s. Accumulation of “sediments on more suitable substrates” and “contaminants in sediment of the Genesee River related to past municipal and industrial waste-water treatment plant discharges...
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Background Past water-quality issues in the St. Lawrence River at Massena, NY resulted in a determination that selected beneficial uses were impaired in a surrounding Area of Concern (AOC) and on the Canadian side of the international boundary (Cornwall, Ontario). The benthic macroinvertebrate community or “benthos” Beneficial Use Impairment (BUI) was designated degraded because impairment metrics were unavailable or inconclusive. Recent sampling efforts by New York State Department of Environmental Conservation (NYSDEC) as part of their Rotating Integrated Basin Studies (RIBS) program indicate that macroinvertebrate communities in some sections of the St. Lawrence River and its tributaries in the Massena AOC are...
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Background : Contaminated bed sediments in much of the Buffalo River AOC (Figure 1A, 1B) were removed (dredged) between 2011 and 2015. Plans to monitor and assess the effectiveness of this management action on 8 of 9 beneficial-use-impairments (BUI), included the benthic macroinvertebrate (benthos) BUI, were revised by the Buffalo Niagara Riverkeeper (Riverkeeper, 2014). Funds needed to implement various monitoring efforts proposed in this plan, however, were not available at that time. The USGS-New York Water Science Center (NYWSC) and the NYSDEC propose a collaborative study to evaluate multiple lines of evidence (toxicity of sediments and the condition of benthic macroinvertebrate communities) to determine...
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Background The Esopus Creek is located in the Catskill Mountains of New York State and is part of the New York City (NYC) drinking water supply system. The basin was dammed in 1915 to form the Ashokan Reservoir splitting the creek into Upper (upstream of the reservoir) and Lower segments. The drainage area of Upper Esopus Creek, between the source (Winisook Lake) and the Ashokan Reservoir is approximately 192 mi2. The Schoharie Reservoir, located 27 miles north of the Ashokan Reservoir, also supplies water to Upper Esopus Creek (and to the Ashokan Reservoir) via the Shandaken tunnel. Waters from the Schoharie watershed enter Upper Esopus Creek at the Shandaken portal and travel 18 km before entering the Ashokan...
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BACKGROUND Watersheds of the Adirondack Mountains receive high levels of acid deposition resulting from atmospheric emissions of nitrogen and sulfur oxides. Acidic deposition has been shown to reduce acid neutralizing capacity (ANC) and calcium (Ca) concentrations, and increase acidity and aluminum (Al) concentrations in soils and surface waters, and affect forest health as well as fish and macroinvertebrate assemblages across the region. The U.S. Environmental Protection Agency (EPA) is currently developing secondary standards for nitrogen and sulfur emissions that will indirectly protect terrestrial and aquatic species and their communities from further adverse impacts and promote recovery of acidified ecosystems...
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Problem The Neversink River and Rondout Creek are historic trout fishing and recreational streams in the heart of the Catskill Mountains of southeastern NY. Waters throughout upper reaches of both rivers currently range from neutral to severely acidic due to deposition of acid rain throughout their watersheds. Fish surveys conducted by the USGS during the late 1980s and early 1990s found that some fish species and entire assemblages were absent or depressed in many tributaries and second and third order reaches of both rivers. Recent decreases in acidity of atmospheric deposition and changes in hydrologic and thermal regimes are now affecting water chemistry (e.g., pH, acid neutralizing capacity, dissolved organic...
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Background: The USGS propose a collaborative investigation with the NYSDEC and NOAA to evaluate the current condition of benthic macroinvertebrate communities and toxicity of bed sediments in the Niagara River Area of Concern (AOC). Using a probabilistic study design, sediment-toxicity data compiled by the USGS, invertebrate community data collected by NYSDEC, and sediment-chemistry data collected by NOAA will be assimilated using a Sediment Quality Triad approach (Chapman et al., 1992; USEPA, 1992) to provide a sediment-quality baseline needed to gauge changes expected to follow remediation of contaminated sediments in parts of the AOC. These data will also be used directly to confirm that the macroinvertebrate...
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Background Discharges from non-point sources, municipal and industrial point sources, and combined sewage overflows over the last century resulted in elevated levels of heavy metals, conventional pollutants, phosphorus, and toxic organic contaminants in water and sediments of the Lower Genesee River and Rochester Embayment. As a result, the zooplankton and phytoplankton or “plankton” communities were designated as one of fourteen Beneficial Use Impairments (BUI); i.e., the resource was either impaired or in need of assessment in the Rochester Embayment Area of Concern (AOC). The Rochester Embayment Remedial Action Committee (RAC) was formed by the New York State Department of Environmental Conservation (NYSDEC)...
Categories: Data, Project; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Aquatic Community Health, Aquatic Community Health, Biogeochemical and Hydrologic Assessment, Biogeochemical and Hydrologic Assessment, BiogeochemicalandHydrologicAssessment, All tags...
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Background With few exceptions, the contemporary and past effects of acidification on fish populations and communities in streams across acid-sensitive regions of NY have not been documented. The pervasive lack of information only permits anecdotal insight into the spatial effects of acidification on stream-fish assemblages and essentially precludes any broad effort to quantify temporal trends and potential recovery of fish assemblages in less acidic or less toxic streams. Though the effects of acidification on fish assemblages have been qualified in several streams of the eastern Adirondacks during 1979, the 1980s, and early 2000s, (Schofield and Driscoll 1987; Simonin et al. 2005) quantitative impacts were...
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Problem - The New York City Department of Environmental Protection (NYCDEP) Stream Management Program, in cooperation with local Soil and Water Conservation Districts, is implementing stream-restoration demonstration projects to decrease channel bed and bank erosion and improve water quality (lower suspended sediment and turbidity) in several priority streams of the Catskill Mountain Region (Fig. 1). A variety of issues relating to (a) the hydraulic geometry of stable and unstable stream channels, (b) validation of underlying assumptions used to characterize channel stability and design, and (c) the effects of restoration on stream-channel geomorphology, stability, biota, and sediment transport have not been...
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Background Forested watersheds in the southwestern Adirondack Mountains of New York received some of the most acidic deposition in North America from the 1970s through much of the 1990s (NADP 2005). Thus it is not surprising that associated effects on surface-water quality and ecosystems in lakes and streams of the southwestern Adirondack Mountains of New York were investigated to various extents over the past 35 years; first to document acidification effects and then to evaluate potential recovery. In fact, evidence of adverse impacts on water quality and aquatic ecosystems across the region provided much support for implementation of the Clean Air Act (CAA) of 1990. Although the underlying effect mechanisms were...
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American Eel (Anguilla Rostrata) Background The U.S. Geological Survey (USGS) has worked in cooperation with The Nature Conservancy (TNC) over the past 11 years to study the effects of channel geomorphology and impoundments on the distribution of common and rare mussels in the Neversink River and to characterize fish assemblages in tributaries to the Upper Delaware River in New York, Pennsylvania, and New Jersey. The focus of this research and monitoring program has recently shifted toward studies of the rapidly declining American eel (Anguilla rostrata) populations in rivers of the tri-state region. There are many factors that could potentially cause the observed declines in local and continental populations of...
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Project Summary. The Western Adirondack Stream Survey (WASS), conducted in 2003-2005, showed that acidic deposition was causing toxic forms of Al to move from soils to streams in 66% of the 565 watersheds assessed in the study region. The WASS encompassed only 20% of the Adirondack region, and for the remaining 80% (referred to hereafter as the East-Central Adirondack region), there is little information on the extent of soil and stream acidification. Based on lake-chemistry data, acidification in the East-Central Adirondack region has been considered minimal relative to the Western Adirondack region. However, some lake acidification has been identified, and WASS results showed that lake acidification under...
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Problem Almost 1900 public, private, and commercial waste-water treatment plants (WWTPs), many located upstream of drinking water intakes or within tributaries to water-supply reservoirs, are permitted to release effluents into surface- or ground-waters across New York State. More than 150 facilities have New York State SPEDES permits to discharge waste waters in the New York City East of Hudson and West of Hudson Water Supply Watersheds (NYC Watersheds), which provide drinking water to more than nine million people in and around New York City. Some common waste water treatment plant (WWTP) contaminants (e.g., polycyclic musks, alkylphenols, and estradiol) can cause estrogenic or androgenic changes in the reproductive...
Categories: Data, Project; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Biogeochemical and Hydrologic Assessment, Biogeochemical and Hydrologic Assessment, BiogeochemicalandHydrologicAssessment, Completed, Contaminants, Emerging, All tags...
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Background The New York State Department of Environmental Conservation (NYSDEC) and Department of Health (NYSDOH), and the U.S. Geological Survey (USGS) plan to obtain data on chemical contaminants in fish from multiple Areas of Concern (AOCs) in New York State and use this information to evaluate fish consumption advisories, which are a critical component of most removal criteria for “Restriction on Fish and Wildlife Consumption” beneficial use impairments (BUI). The first project will be implemented in the Buffalo River AOC during summer 2017. This project will help determine if current fish consumption advisories each AOC are appropriate, if they can be modified, and if they support or do not support BUI removal...
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Background: The USGS propose a collaborative investigation with the NYSDEC to evaluate the current condition of benthic macroinvertebrate communities and toxicity of bed sediments in the Eighteenmile Creek Area of Concern (AOC). Sediment-toxicity data provided by the USGS and benthic-community data provided by the NYSDEC from inside the AOC will be compared to similar data from non-AOC sites in Eighteenmile Creek or nearby reference streams (of comparable drainage areas) to determine if the benthos-BUI (Beneficial-Use Impairment) designation is appropriate or if the BUI could be removed in Eighteenmile Creek. The remainder of this pre-proposal addresses only the direct USGS (sediment toxicity assessment) contribution...
    map background search result map search result map Estrogenicity in Streams of New York State Geomorphology, Biology, & Stability of Catskill Mountain Streams, New York Estimating Acute and Chronic Toxicity of Waters from the Rochester Embayment Area of Concern Using Two Plankton Species Assessing American Eel Populations in Tributaries to the Upper Delaware River Sediment toxicity and status of benthic invertebrate communities in the St. Lawrence River and its tributaries within the Massena Area-of-Concern Sediment Toxicity and Condition of Benthic Invertebrate Communities in the Rochester Embayment Area-of-Concern Assessing Spatiotemporal Patterns in Fish Assemblages from Acid-Sensitive Streams in the Adirondack and Catskill Mountains Quantitative Assessment of Water Quality in Upper Esopus Creek: Fish, Macroinvertebrates, Periphyton, Turbidity, and Nutrients Emerging Methods for Detection and their Potential for Inventorying Brook Trout Populations in Streams of the Western Adirondacks Long-term Effects of the Clean Air Act on Water Toxicity and Brook Trout Survival in Acidified Streams of the Southwestern Adirondacks, 1984-2017 Status of benthic macroinvertebrate communities and toxicity of sediments in the Niagara River Area of Concern, New York Status of benthic macroinvertebrate communities and toxicity of sediments in the Eighteenmile Creek Area of Concern, New York Assessment of Acidic Deposition Effects on the Chemistry and Benthos of Streams of the East-Central Adirondack Region Effects of acid-base chemistry on biology of lakes and streams in the Adirondack Mountains Sediment toxicity and status of benthic macroinvertebrate communities in the remediated Buffalo River Area-of-Concern Responses of fish assemblages to changing environmental conditions in the Neversink River and Rondout Creek Contaminants in fish tissues from AOCs in New York State: The Buffalo River AOC 2-year post remediation Sediment toxicity and status of benthic macroinvertebrate communities in the remediated Buffalo River Area-of-Concern Contaminants in fish tissues from AOCs in New York State: The Buffalo River AOC 2-year post remediation Sediment toxicity and status of benthic invertebrate communities in the St. Lawrence River and its tributaries within the Massena Area-of-Concern Estimating Acute and Chronic Toxicity of Waters from the Rochester Embayment Area of Concern Using Two Plankton Species Sediment Toxicity and Condition of Benthic Invertebrate Communities in the Rochester Embayment Area-of-Concern Status of benthic macroinvertebrate communities and toxicity of sediments in the Eighteenmile Creek Area of Concern, New York Quantitative Assessment of Water Quality in Upper Esopus Creek: Fish, Macroinvertebrates, Periphyton, Turbidity, and Nutrients Status of benthic macroinvertebrate communities and toxicity of sediments in the Niagara River Area of Concern, New York Responses of fish assemblages to changing environmental conditions in the Neversink River and Rondout Creek Emerging Methods for Detection and their Potential for Inventorying Brook Trout Populations in Streams of the Western Adirondacks Long-term Effects of the Clean Air Act on Water Toxicity and Brook Trout Survival in Acidified Streams of the Southwestern Adirondacks, 1984-2017 Assessing American Eel Populations in Tributaries to the Upper Delaware River Assessing Spatiotemporal Patterns in Fish Assemblages from Acid-Sensitive Streams in the Adirondack and Catskill Mountains Geomorphology, Biology, & Stability of Catskill Mountain Streams, New York Assessment of Acidic Deposition Effects on the Chemistry and Benthos of Streams of the East-Central Adirondack Region Effects of acid-base chemistry on biology of lakes and streams in the Adirondack Mountains Estrogenicity in Streams of New York State