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To improve our understanding of health and immune function in tortoises, we evaluated both standard blood diagnostic (body condition, hematologic, plasma biochemistry values, trace elements, plasma proteins, vitamin A levels) and gene transcription profiles in 21 adult tortoises (11 clinically abnormal; 10 clinically normal) from Clark County, NV, USA. Necropsy and histology evaluations from clinically abnormal tortoises revealed multiple physiological complications, with moderate to severe rhinitis or pneumonia being the primary cause of morbidity in all but one of the examined animals. Improved methods for health assessments are an important element of monitoring tortoise population recovery and can support the...
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This dataset represents ease of access to bottomland areas for vegetation treatments. Access may be by road, 4x4 near road, hike in by field crews or requiring overnight camping or raft access. Access is considered for each side of the river separately.
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This data set shows the extent of the Colorado River Conservation Planning project bottomland area as delineated by topography and vegetation, The bottomland area is subdivided into 1 km polygons measured from the upstream project boundary. Reach breaks were determined by large topographic shifts and/or tributary junctions by John Dohrenwend. Please see the project report for more details.
(i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney,...
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We collected detailed spatial data on the density and size distribution of intertidal snails as part of a broader effort to understand food webs in California estuaries. The survey area was Carpinteria Salt Marsh, California USA, which comprises 9 Ha tidal channels, 2 Ha salt flats, 17 Ha upland habitat, 6 Ha tidal pans, 52 Ha vegetated marsh, 2 Ha tidal flats. Using nearly 4,000 transects in potential snail habitat, we mapped snails throughout the estuary. Specifically, we systematically placed transects at intervals stratified within targeted habitat types: channels, pans, or marsh (or planar habitat that was mixed marsh and pan). At a quarter of the quadrats, we also estimated snail size-frequency distributions....
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All plant species were identified down to finest taxa when possible. Each plant code used in the survey data is paired to a plant code on this species list which provides the full scientific name of each species, the plant family the species belongs to, the native or non-native status of species, and the life history of the plant. Plant nomenclature follows: Baldwin B.G., D.H. Goldman, D.J. Keil, R. Patterson, T.J. Rosatti, and D.H. Wilken, editors. 2012. The Jepson Manual: vascular plants of California. Second edition. University of California Press, Berkeley, USA.
The data set contains the results of experimental challenge of captive zebra finches with an American crow isolate of West Nile virus (WNV). Data include infectivity, mortality, viremia, oral shedding of virus, and serology for anti- WNV antibodies. Australian and Timor zebra finches were used in this study and both are useful as a laboratory model of an avian species with moderate susceptibility to WNV.
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This dataset represents an archived record of annual California sea otter surveys from 1985-2014. Survey procedures involve counting animals during the "spring survey" -- generally beginning in late April or early May and usually ending in late May early June but may extend into early July, depending on weather conditions. Annual surveys are organized by survey year and within each year, three shapefiles are included: census summary of southern sea otter, extra limit counts of southern sea otter, and range extent of southern sea otter. The surveys, conducted cooperatively by scientists of the U.S. Geological Survey, California Department of Fish and Wildlife, U.S. Fish and Wildlife Service and Monterey Bay Aquarium...
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This dataset consists of the boundary extent used to evaluate regolith thickness, bedrock altitude, depth to water, potentiometric-surface altitude, and saturated thickness for the shallow groundwater system in the Lower Gunnison River Basin, in Delta, Montrose, Ouray, and Gunnison Counties, Colorado. The U.S. Geological Survey prepared this dataset in cooperation with the Colorado Water Conservation Board.
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This is a model showing general habitat diversity, including both the structural and cover type diversity. See Open File Report, Rasmussen and Shafroth, Colorado River Conservation Planning for geoprocessing details.
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This dataset represents the relative average amount of non-woody cover within 2 ha) of bottomland along the Colorado River from the Colorado state line (San Juan and Grand Counties, Utah) to the southern Canyonlands NP boundary, as of September 2010. Traditional image interpretation cues were used to develop the polygons, such as shape, size, pattern, tone, texture, color, and shadow, from high resolution, true color, aerial imagery (0.3m resolution), acquired for the project. Additional, public available aerial photos (NAIP, 2011) were used to cross-reference cover classes. As with any digital layer, this layer is a representation of what is actually occurring on the ground. Errors are inherent in any interpretation...
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We used the 1981 historical imagery of the Escalante River, Utah in ArcGIS to quantify channel area and average width and quantify woody riparian vegetation cover in two reaches of the river. Reach 1 was approximately 15 river kilometers (rkms) long and located between Sand and Boulder creeks within Grand Staircase Escalante National Monument. Reach 2 was approximately 16 rkms in length, extending from the Glen Canyon National Recreation Area boundary to just upstream of Choprock Canyon. We delineated the extent of active channel. Active channel was defined as the portion of the channel free of vegetation. We also delineated fluvial geomorphic features such as point bars, mid-channel bars, lateral bars and floodplain....
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This dataset represents the variety (unique structural classes: water, bare, herbaceous, short shrubs, medium shrubs, short trees, tall trees) within 1 ha of bottomland areas. Traditional image interpretation cues were used to develop the polygons, such as shape, size, pattern, tone, texture, color, and shadow, from high resolution, true color, aerial imagery (0.3m resolution), acquired for the project. Additional, public available aerial photos (NAIP, 2011) were used to cross-reference cover classes. As with any digital layer, this layer is a representation of what is actually occurring on the ground. Errors are inherent in any interpretation of ground qualities. Due to the "snapshot" nature of the aerial photos,...
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We report the site number and locations of 5798 streamflow gages displaying zero flow for at least one day in their daily records. 4891 of these gages are from the GRDC network, and 906 are USGS gages in the contiguous US. Additionally, provisional data for two USGS gages 1) Rio Puerco near Bernardo, NM (USGS site: 08353000) and 2) Agua Fria River Near Mayer, AZ (USGS site: 09512500) are provided to illustrate zero flow record behaviors.
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These data were collected as part of a field trial to test the effectiveness of a sylvatic plague vaccine (see Rocke et al., 2017 for details). Vaccine and control plots were selected randomly from the available pairs at each location. Baits containing Rhodamine B, a biomarker, were distributed at each plot. At least 1 week and no more than 2 months post-baiting each year, local collaborators captured, marked, and sampled prairie dogs. Hair and whisker samples were collected from up to 50 unique prairie dogs from each plot each year. Sex, age, weight, and the identity of all current-year and prior-year recaptures were recorded for each captured animal. In the laboratory, hair/whiskers were assessed for the presence...
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This raster represents a continuous surface of sage-grouse habitat suitability index (HSI) values for northeastern California. HSIs were calculated for spring (mid-March to June), summer (July to mid-October), and winter (November to March) sage-grouse seasons, and then multiplied together to create this composite dataset.
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This data set includes results for hormone and pharmaceutical compounds analyzed in environmental and quality-control samples collected by the USGS National Water-Quality Assessment Project during 2013 through 2015 for a study of groundwater resources used for drinking-water supply across the United States. Hormone and pharmaceutical results are provided for environmental samples collected at 1,120 wells or springs; selected ancillary data, such as principal aquifer, well depth, and land-use information also are provided for the sampled sites. The types of quality-control samples included in this data set are blanks, matrix spikes, and replicates collected at field sites or field offices. Included in this data...
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This metadata record documents 11 comma delimited tables representing the amount of reported best management practice (BMP) implementation for the years from 1985 to 2014 at three geographic scales: county or land-river modeling segment, River Input Monitoring (RIM) station drainage areas, and the entire Chesapeake Bay Watershed (CBWS). Data originated from the Chesapeake Bay Watershed jurisdictions including Maryland, Pennsylvania, Virginia, Delaware, New York, West Virginia, and the District of Columbia. Data were reported to the Chesapeake Bay Program for an annual review of progress toward meeting nitrogen, phosphorus, and sediment reduction goals.
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Lake Poinsett is a 260-hectare (640 acres) lake located on Crowley’s Ridge in northeastern Arkansas, approximately 6 km southeast of Harrisburg, Arkansas within Poinsett County. The lake was built for recreation by the Arkansas Highway Department in 1960 by constructing a roughly 800-meter dam across the southern boundary of the Distress Creek watershed. The dam is currently operated by the Arkansas Game and Fish Commission (AGFC). AGFC and Arkansas Natural Resources Commission (ANRC) plan to drain the lake to allow access for a series of bank stabilization and dam safety improvements. Because none of the original blueprints exist, AGFC asked the U.S. Geological Survey (USGS) to conduct a series of differential...
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This map shows the channel boundary (2011) of the Colorado River mainstem between the Utah Colorado border and the upper pool of Lake Powell, Utah (146 miles). The channel boundary was mapped from public available NAIP imagery flown on June 28, 2011, when the river flow was 886 m3/s at the Cisco gage. The channel is subdivided into channel types: fast water (main channel, secondary channel), and still water types (backwater, isolated pool and tributary channel).
map background search result map search result map Species List Distribution and mapping of the snail Cerithideopsis (Cerithidea) californica at Carpinteria Salt Marsh, California USA, June to August 2012 Conservation Planning for the Colorado River in Utah - Stillness of water for Bat Watering Model Conservation Planning for the Colorado River in Utah - General Diversity Model Output Data for Colorado River in Utah Conservation Planning for the Colorado River in Utah - Diversity of All Structural Types for General Diversity Model Conservation Planning for the Colorado River in Utah - Open Areas for Open Land Species Model Conservation Planning for the Colorado River in Utah - Access to the Site for Relative Cost of Restoration Model Boundary extent for datasets of regolith thickness, bedrock altitude, depth to water, potentiometric-surface altitude, and saturated thickness for the shallow groundwater system in the Lower Gunnison River Basin, Colorado Blood variable data for clinically normal and clinically abnormal Mojave Desert tortoises (Gopherus agassizii) in 2013 SPV field trials bait uptake data Annual California Sea Otter Census - 1985-2014 Spring Census Summary Conservation Planning for the Colorado River in Utah - Bottomland Boundary of the Colorado River Divided at Homogeneous River Reaches Environmental and Quality-Control Data Collected by the USGS National Water-Quality Assessment Project for Hormones and Pharmaceuticals in Groundwater Used as a Source of Drinking Water Across the United States, 2013-15 A polygon shapefile of bottomland vegetation cover and geomorphic features of the Escalante River, Utah mapped from 1981 aerial imagery 1) Best management practice implementation in the Chesapeake Bay watershed from 1985 to 2014 Geophysical Surveys at Lake Poinsett Dam, Poinsett County, Arkansas Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data Composite Habitat Suitability Index Raster Dataset Geophysical Surveys at Lake Poinsett Dam, Poinsett County, Arkansas Distribution and mapping of the snail Cerithideopsis (Cerithidea) californica at Carpinteria Salt Marsh, California USA, June to August 2012 A polygon shapefile of bottomland vegetation cover and geomorphic features of the Escalante River, Utah mapped from 1981 aerial imagery Boundary extent for datasets of regolith thickness, bedrock altitude, depth to water, potentiometric-surface altitude, and saturated thickness for the shallow groundwater system in the Lower Gunnison River Basin, Colorado Conservation Planning for the Colorado River in Utah - Stillness of water for Bat Watering Model Conservation Planning for the Colorado River in Utah - Open Areas for Open Land Species Model Conservation Planning for the Colorado River in Utah - General Diversity Model Output Data for Colorado River in Utah Conservation Planning for the Colorado River in Utah - Diversity of All Structural Types for General Diversity Model Conservation Planning for the Colorado River in Utah - Access to the Site for Relative Cost of Restoration Model Conservation Planning for the Colorado River in Utah - Bottomland Boundary of the Colorado River Divided at Homogeneous River Reaches Composite Habitat Suitability Index Raster Dataset Blood variable data for clinically normal and clinically abnormal Mojave Desert tortoises (Gopherus agassizii) in 2013 Species List Annual California Sea Otter Census - 1985-2014 Spring Census Summary 1) Best management practice implementation in the Chesapeake Bay watershed from 1985 to 2014 SPV field trials bait uptake data Environmental and Quality-Control Data Collected by the USGS National Water-Quality Assessment Project for Hormones and Pharmaceuticals in Groundwater Used as a Source of Drinking Water Across the United States, 2013-15 Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data