Filters: Tags: Endangered species (X) > partyWithName: U.S. Geological Survey - ScienceBase (X) > Categories: Data (X)

Filters Date Range Past year (39) Past month (0) Past week (0) Past day (0) Custom range... To   Search Extensions Raster (15) Shapefile (14) ArcGIS Service Definition (1) NetCDF OPeNDAP Service (1) Types Map Service (35) Downloadable (30) OGC WFS Layer (19) OGC WMS Layer (19) GeoTIFF (15) More... Contacts U.S. Geological Survey Ecosystems Kristina Montoya-Aiona U.S. Geological Survey, NW-PACIFIC ISLAND REG Barbara E Kus More... Categories Data Release - Revised (3) Tag Types Theme (103) Place (100) USGS Scientific Topic Keyword (50) Harvest Set (59) Tag Schemes USGS Thesaurus (88) None (62) Common geographic areas (49) ISO 19115 Topic Category (79) Getty Thesaurus of Geographic Names (15) Geographic Names Information System (GNIS) (7) USGS Biocomplexity Thesaurus (14) More... View Results as: JSON ATOM CSV

Effects of warming on development rates on Karner Blue Butterfly laboratory data (2011-2012) The dataset is associated with a project that examines effects of climate change on the federally endangered Karner blue butterfly (Lycaeides melissa samuelis) by subjecting different life stages of the Karner blue to both historically average temperature regimes and temperature regimes 2, 4, and 6 degrees Celsius above historic means. This dataset is composed of two spreadsheets: one for data collected in 2011, and the other for data collected in 2012. All experimental subjects were from an experimental colony of Karner blues maintained at the University of Notre Dame and derived from Karner blues collected, under USFWS permit, from Indiana Dunes National Lakeshore in 2010. Karner blues were subjected to the different... Categories: Data; Tags: Ecology, Indiana Dunes National Park, Karner blue butterfly, USGS Science Data Catalog (SDC), University of Notre Dame, All tags... biota, effects of climate change, endangered species, environment, phenology, Fewer tags Effects of shading on the rare plant species, Physostegia correllii (Lamiaceae) The original distribution of the study species Physostegia correllii included freshwater floodplains of large rivers in the southcentral U.S. (Colorado, Rio Grande, Mississippi). Experiments to determine the effects of shading on P. correllii were conducted using short-term shade cloth treatments (full sunlight vs. 30% shading for 2-3 weeks). Mean height and cover responses of individuals were determined in conservation gardens located in Lafayette, Louisiana. Physostegia correllii plants were grown in shaded environments for 2.5 weeks. Categories: Data; Tags: Botany, Colorado River, Ecology, Louisiana, Lower Rio Grande, All tags... Mississippi River, Rio Grande, Texas, USGS Science Data Catalog (SDC), biota, climate change, climate drying, disturbance fugitive, effects of climate change, endangered species, environment, floodplain, habitat alteration and disturbance, rare, endangered, and threatened, ruderal species, seed bank, seep spring drying, shade experiment, southcentral U.S., Fewer tags Whooping crane migration habitat selection disturbance data, 2010–2016 These data were developed to support an effort to understand how whooping cranes select stopover habitat in the presence of human infrastructure. Location and associated data came from whooping cranes (Grus americana) from the Aransas-Wood Buffalo Population, 2010–2016. We marked a sample of 57 whooping cranes with leg-mounted transmitters that acquired locations via the global positioning system (GPS) network and transmitted those data through the Argos satellite system. Cranes were captured either at their natal areas in and adjacent to Wood Buffalo National Park in Canada or at their southern terminus along the Texas Gulf Coast, USA. Data herein include 9,347 ground locations used by whooping cranes during migration... Categories: Data; Tags: Kansas, Migratory birds, Montana, Nebraska, North Dakota, All tags... Oklahoma, South Dakota, Texas, biota, birds, endangered species, environment, migration (organisms), plant and animal tagging, wind energy, Fewer tags Piping plover adult and natal dispersal distances in the Northern Great Plains, USA 2014-2019 We present two tabular data sets representing values to examine sources of variation in natal and breeding dispersal distances for piping plovers breeding in the Northern Great Plains from 2014-2019 focusing on four study areas: U.S. Alkali Wetlands, Lake Sakakawea, Garrison Reach of the Missouri River, and Lake Oahe. We included habitat variables, and conspecific densities in both datasets and include nest fates and mate fidelity in the breeding dispersal dataset. Categories: Data; Tags: Lake Oahe, Lake Sakakawea, Missouri Coteau, Missouri River, Nests, All tags... North Dakota, Population ecology, South Dakota, Wading birds, biota, birds, dispersal (organisms), endangered species, population and community ecology, river systems, wildlife population management, Fewer tags PIT Tags Encountered by Klamath Falls Field Station Equipment in the Upper Klamath Basin Note: this data release has been superseded by version 2.0, available here: https://doi.org/10.5066/P9L1GPKI Data were collected as part of a long-term capture-recapture program to assess the status and dynamics of populations of two long-lived, federally endangered catostomids in Upper Klamath Lake, Oregon and Clear Lake Reservoir, California. Lost River suckers (LRS; Deltistes luxatus) and shortnose suckers (SNS; Chasmistes brevirostris) have been captured and tagged with passive integrated transponder (PIT) tags during their spawning migrations in each year since 1995.PIT tagged species were encountered in netting efforts, remote transceivers, and active scanning on bird colonies across the Upper Klamath River... Categories: Data; Tags: Clear Lake National Wildlife Refuge, Ecology, USGS Science Data Catalog (SDC), Upper Klamath Lake, animal tracking, All tags... ecology, endangered species, inlandWaters, Fewer tags Piping plover breeding habitat selection in the Northern Great Plains, USA, 2014–2019 We present a tabular data set representing values used to evaluate hypotheses of breeding habitat selection for immigrants and returning Northern Great Plains piping plovers (Charadrius melodus) from 2014 – 2019. The associated manuscript uses network analysis approach to evaluate five hypotheses of habitat selection. In this approach breeding locations were nodes and successive year breeding attempts form the edges (immigration) and self-loops (fidelity). Included in the dataset are covariates of habitat amount, conspecific density, and habitat quality, as well as other fields used in the analysis. In addition, we include descriptive breeding location-specific metrics from the network graphs. Categories: Data; Tags: Ecology, Lake Oahe, Lake Sakakawea, Missouri Coteau, Missouri River, All tags... Montana, Nests, North Dakota, Population ecology, South Dakota, USGS Science Data Catalog (SDC), Wildlife Biology, biota, birds, dispersal (organisms), endangered species, habitats, population and community ecology, river systems, wildlife biology, wildlife population management, Fewer tags Location Data for mtDNA Samples Location information regarding samples taken for each individual. Categories: Data; Types: Citation; Tags: California, Carrizo Plain, Cuyama River Watershed, Gambelia sila, Panoche Plateau, All tags... Panoche Valley, RADseq, San Joaquin Desert, San Joaquin Valley, admixture, endangered species, Fewer tags Location Data for Microsatellite Samples Location information regarding samples taken for each individual. This data sheet is to be used in conjunction with the 'Convert' file. Categories: Data; Types: Citation; Tags: California, Carrizo Plain, Cuyama River Watershed, Gambelia sila, Panoche Plateau, All tags... Panoche Valley, RADseq, San Joaquin Desert, San Joaquin Valley, admixture, endangered species, Fewer tags Antioch Dunes Evening Primrose (Oenothera deltoides subsp. howellii) Juvenile and Adult Abundance Across the Known Range, California, USA (2019) These datasets provide information on total plant cover, Normalized Difference Vegetation Index, and Antioch Dunes evening primrose (Oenothera deltoides subsp. howellii) abundance within grids across the subspecies' extant range in California. These data support the following publication: Jones, S.F., Kennedy, A., Freeman, C.M. et al. Intensity of grass invasion negatively correlated with population density and age structure of an endangered dune plant across its range. Biol Invasions (2021). https://doi.org/10.1007/s10530-021-02516-5 Categories: Data; Tags: Antioch Dunes, California, USGS Science Data Catalog (SDC), biota, coastal ecosystems, All tags... ecology, endangered species, invasive species, remote sensing, Fewer tags Molecular data and results needed to better understand codiversification of freshwater mussels (Unionidae: Quadrulini) and their parasitic larval hosts The North American freshwater mussel tribe Quadrulini has a suite of life history adaptations, however, the evolution of life histories in this group has yet to be explored using comparative phylogenetic methods. Here we provide the AHE DNA sequence alignment representing 27 species from the subfamily Ambleminae that was used to estimate a phylogenomic reconstruction of Quadrulini. Additionally, we provide a compilation of host use information and larval length and height measurements utilized to trace the evolution of life history characteristics, such as larval morphology and host attraction strategy. Phylogenetic trees are presented representing phylogenetic inference performed under Maximum Likelihood, Maximum... Categories: Data; Tags: Aquatic Biology, DNA sequencing, Genetics, USGS Science Data Catalog (SDC), biota, All tags... conservation genetics, cryptic species, endangered species, generic reclassification, incomplete lineage sorting, integrative taxonomy, phylogenetic systematics, species delimitation, species diversity, systematics and taxonomy, Fewer tags EverSparrow model scripts and outputs EverSparrow is a spatially explicit Bayesian model of Cape Sable Seaside Sparrow (Ammospiza maritima mirabilis; CSSS) presence that quantifies the interdependent relationships between a range of environmental factors and CSSS presence. Using hydrologic conditions such as mean 4-year hydroperiod and maximum depth, fire occurrence history, and vegetation structure throughout the range of CSSS, EverSparrow provides weekly probabilities of CSSS presence on a 400 x 400 m grid. Here we provide the modeling scripts used to develop EverSparrow (including the frequentist model developed and included in the ensemble model), the validation scripts, a script to run the EverSparrow model and create predicted surfaces of CSSS... Categories: Data; Tags: Ecology, Everglades, Southern Florida, USGS Science Data Catalog (SDC), USGS-EMA-LOW-SB T&E: Listed birds, All tags... decision support methods, endangered species, statistical modeling, wetland restoration, Fewer tags Genomic and Demographic Data from the San Francisco Gartersnake We used genome-wide single nucleotide polymorphism (SNP) data and capture-mark-recapture methods to evaluate the genetic diversity and demography within seven focal sites of the endangered San Francisco gartersnake (Thamnophis sirtalis tetrataenia). As Thamnophis sirtalis tetrataenia is listed as endangered by the U.S. Fish and Wildlife Service (USFWS), sensitive location information can be made available upon request by contacting Brian J. Halstead and/or Amy G. Vandergast. Categories: Data; Tags: San Francisco Peninsula, San Mateo County, Santa Clara County, Santa Cruz County, Thamnophis, All tags... biota, effective population size, endangered species, genetic diversity, population and community ecology, Fewer tags Southwestern Willow Flycatcher (Empidonax traillii extimus) Surveys and Nest Monitoring in San Diego County, California, 2017 Data presented are results of surveys and monitoring in 2017 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at locations along the San Luis Rey, Sweetwater, and Tijuana Rivers, and nest monitoring was performed at three locations along the San Luis Rey River downstream of Lake Henshaw (Cleveland National Forest, Rey River Ranch, Vista Irrigation District). Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, San Luis Rey River, biota, birds, endangered species, All tags... habitats, population and community ecology, riparian habitats, survey, survival, Fewer tags Southwestern Willow Flycatcher (Empidonax traillii extimus) Surveys in San Diego County, California, 2023 Data presented are results of surveys in 2023 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at the 2016-19 nest monitoring locations (Cleveland National Forest, Rey River Ranch, and Vista Irrigation District) and at Lake Henshaw along the Upper San Luis Rey River. Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult or juvenile), sex, banding status (color banded or not, and if so, color combination), and breeding status (paired, undetermined, or transient)... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, San Luis Rey River, biota, birds, endangered species, All tags... habitats, population and community ecology, riparian habitats, survey, survival, Fewer tags Diets and Stable Isotopes of Fishes in Rodeo Lagoon, California, 2016-2017 This dataset includes lab data for fish, fish diets, and stable isotopes for fish tissue, vegetation, and invertebrates collected during daylight hours in the Rodeo Lagoon and Lake in Golden Gate National Recreation Area at the Pacific Coast, USA during 2016 and 2017. This data release includes all animal taxa, and isotope values included in the analysis. Categories: Data; Tags: Aquatic Biology, Aquatic Biology, California, Central California Coastal, Ecology, All tags... Golden Gate, Marin, USGS Science Data Catalog (SDC), United States, Wildlife Biology, aquatic vegetation, biological taxonomy, biota, coastal ecosystems, endangered species, environment, eutrophication, fish, invertebrates, light stable isotope analysis, oxygen content (water), vegetation, Fewer tags Chloropyron maritimum subsp. maritimum population counts, tide, and weather data for Sweetwater Marsh National Wildlife Refuge Chloropyron maritimum subsp. maritimum population counts at Sweetwater Marsh National Wildlife Refuge, California, and tide and weather data from San Diego, California, are used to explain interannual variation in Chloropyron counts and to predict past population counts. Categories: Data; Types: Map Service, OGC WFS Layer, OGC WMS Layer, OGC WMS Service; Tags: Ecology, High Salt Marsh, San Diego, Southern California Bight, USGS Science Data Catalog (SDC), All tags... Water Resources, air temperature, biota, endangered species, population dynamics, precipitation (atmospheric), tides (oceanic), Fewer tags PIT Tags Encountered by Klamath Falls Field Station Equipment in the Upper Klamath Basin 1993-2023 (ver. 2.0, August 2023) Note: this data release has been superseded by version 3.0, available here: https://doi.org/10.5066/P1385SV2 Data were collected as part of a long-term capture-recapture program to assess the status and dynamics of populations of two long-lived, federally endangered catostomids in Upper Klamath Lake, Oregon and Clear Lake Reservoir, California. Lost River suckers (LRS; Deltistes luxatus) and shortnose suckers (SNS; Chasmistes brevirostris) have been captured and tagged with passive integrated transponder (PIT) tags during their spawning migrations in each year since 1995.PIT tagged species were encountered in netting efforts, remote transceivers, and active scanning on bird colonies across the Upper Klamath River... Categories: Data, Data Release - Revised; Tags: Aquatic Biology, Clear Lake National Wildlife Refuge, USGS Science Data Catalog (SDC), Upper Klamath Lake, animal tracking, All tags... ecology, endangered species, inlandWaters, salmonids, suckers, Fewer tags Experimental evaluation of predator exclosures on nest, chick, and adult survival data for the Northern Great Plains piping plover, 2014 - 2016 This dataset presents four tabular data files that evaluate the effect of predator exclosures around piping plover (Charadrius melodus) nests on plover nest, chick, within-season, and annual adult survival. During 2014-2016, we designed an experiment to examine nest (n = 418), chick (n = 453), and adult (n = 367) survival at alkaline wetlands of the Northern Great Plains. Alkaline wetlands were divided between treatment wetlands and control wetlands (no exclosures placed anywhere on wetland). Field crews aimed to place predator exclosures around half of all plover nests found resulting in three treatment types: uncaged nest on control wetland, uncaged nest on treatment wetland, and caged nest on treatment wetland.... Categories: Data; Tags: Birds, Ecology, Montana, Nests, North Dakota, All tags... Population ecology, USGS Science Data Catalog (SDC), Wildlife Biology, biota, birds, capturing (animals), endangered species, field experiments, population and community ecology, wildlife biology, wildlife population management, Fewer tags Least Bell's Vireo Habitat Suitability Model for California (2019) This habitat model was developed to identify suitable habitat for the federally-endangered least Bell’s vireo (Vireo bellii pusillus) across its current and historic range in California. The vireo disappeared from most of its range by the 1980s, remaining only in small populations in southern California. Habitat protection and management since the mid-1980s has led to an increase in southern California vireo populations with small numbers of birds recently expanding into the historic range. Predictions from this model will be used to focus surveys in the historic range to determine where vireos are recolonizing and to track the status and distribution of populations over time. We used the Partitioned Mahalanobis... Categories: Data; Types: ArcGIS REST Map Service, ArcGIS Service Definition, Downloadable, Map Service; Tags: California, Least Bell's vireo, Life sciences, USGS Science Data Catalog (SDC), Vireo bellii pusillus, All tags... Wildlife Biology, biota, endangered species, environment, geospatial analysis, habitat, landscape modeling, multivariate statistical analysis, native species, niche modeling, partitioned Mahalanobis D2, shrubland ecosystems, species distribution models, statistical analysis, wildlife, Fewer tags Southwestern Willow Flycatcher (Empidonax traillii extimus) Surveys and Nest Monitoring in San Diego County, California, 2018 Data presented are results of surveys and monitoring in 2018 for Southwestern Willow Flycatcher (Empidonax traillii extimus) in San Diego County, California. Surveys were conducted at locations along Escondido Creek, Los Penasquitos Creek, San Diego River, Otay River, and the San Luis Rey River, and nest monitoring was performed at three locations along the San Luis Rey River downstream of Lake Henshaw (Cleveland National Forest, Rey River Ranch, Vista Irrigation District). Surveys were conducted along multiple sections of the river where permission to access properties could be obtained. Locations were surveyed using a standardized protocol three to four times between 15 May and 31 July. The number, age (adult... Categories: Data; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: San Diego, San Luis Rey River, biota, birds, endangered species, All tags... habitats, population and community ecology, riparian habitats, survey, survival, Fewer tags « 1 2 3 4 5 6 »