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This dataset contains information from visual encounter surveys conducted between 2012 and 2016 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort in the Oregon Cascade Mountain Range. We surveyed 91 sites using a rotating frame design in the Klamath and Deschutes Basins, Oregon, which encompass most of the species' core extant range. Data consist of spotted frog counts aggregated by date, location, and life stage, as well as data on environmental conditions at the time of each survey.
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This data release contains tabular digital data describing calculated hourly back trajectory position coordinates for air masses contributing to five selected precipitation-mercury deposition episodes at National Atmospheric Deposition Program monitoring site IN21 (National Atmospheric Deposition Program, 2017) in southeastern Indiana during 2009‒2015. The air pollution transport and dispersion modeling system HYSPLIT (Stein et. al, 2015) was used to calculate the back trajectory position coordinates during 48 hours preceding the start of each episode. The 40-km gridded input data to HYSPLIT were from National Oceanic and Atmospheric Administration (2017). Continuous, digital precipitation depth data were recorded...
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These data are bathymetry (river bottom elevation) in XYZ format, generated from the March 29-30, 2017 and April 13, 2017, bathymetric survey of the East Fork White River at Columbus, Indiana. The bathymetry was collected from approximately the confluence of Driftwood and Flatrock rivers, downstream to the confluence of Haw Creek. Hydrographic data were collected using an acoustic Doppler current profiler (ADCP) with integrated Differential Global Positioning System (DGPS). Data were collected as the surveying vessel traversed the river, approximately perpendicular to the velocity vectors at 55 cross sections which were spaced 200 feet apart along the river. Additional cross sections were collected upstream and...
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Sediment samples and samples for water-toxicity testing were collected during 2014 from several streams in San Antonio, Texas known locally as the Westside creeks (Alazán, Apache, Martínez, and San Pedro Creeks) and from the San Antonio River. Samples were collected once during base-flow and again after periods of storm-water runoff (post-storm conditions) to determine baseline sediment- and water-quality conditions. Streambed-sediment samples were analyzed for selected constituents, including trace elements and organic contaminants such as pesticides, polychlorinated biphenyls (PCBs), brominated flame retardants, and polycyclic aromatic hydrocarbons (PAHs).
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The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide...
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Snags provide critical habitat for nearly one-third of wildlife species in forests of the Pacific Northwest, so historic declines in snags are thought to have had a strong impact on biodiversity. Resource managers often create snags to mitigate the scarcity of snags within managed forests, but information regarding the function and structure of created snags across long time periods (>20 years) is absent from the literature. Using snags that were created by topping mature Douglas-fir trees (Pseudotsuga menziesii) as part of the OSU College of Forestry Integrated Research Project, we measured characteristics of 731 snags and quantified foraging and breeding use of snags by birds 25-27 years after their creation....
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The dataset consists of site identification, location, temperature and CO2 flux from diffuse emission measurement at the Tiptop fire. A total of 40 CO2 flux measurements were made at 27 locations, including five points (seven measurements) outside of the active coal fire area.
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These data describe the catch and biological data from 363 bottom-set gill-net lifts distributed throughout Lake Michigan (including main basin and Green Bay) between April and November in 1930–1932. Data collected from the R/V Fulmar were recorded in notebooks and are now archived at the U.S. Geological Survey’s Great Lakes Science Center. Each lift included 1–7 gangs of linen gill nets. Each gang comprised 3–5 panels each having a length of 155 m, a height of 1.5 m, and a (stretch-)mesh size of either 60, 64, 67, 70, or 76 mm. The digitization of the Fulmar data notebooks was started in the late 1990s and finished in this study.
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The data document the results of several microbe bioassays performed by the USGS on Phragmites australis plants, including those performed on mature leaves, seedlings, and dead leaf tissues exploration of the literature to find accounts of microbes associated with Phragmites worldwide. For the bioassays, we prepared 162 pure cultures isolated from Phragmites plants in North America along the east coast, Florida, the Gulf of Mexico, and the Great Lakes area, 125 of which were from a previous study, and 38 represent new collections. The DNA sequences used to identify the 37 new collections are included. Microbes were isolated from plants collected from 2015-2018. We performed assays using both North American plant...
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This data set includes results for hormone and pharmaceutical compounds analyzed in environmental and quality-control samples collected by the USGS National Water-Quality Assessment Project during 2013 through 2015 for a study of groundwater resources used for drinking-water supply across the United States. Hormone and pharmaceutical results are provided for environmental samples collected at 1,120 wells or springs; selected ancillary data, such as principal aquifer, well depth, and land-use information also are provided for the sampled sites. The types of quality-control samples included in this data set are blanks, matrix spikes, and replicates collected at field sites or field offices. Included in this data...
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***This dataset is superseded by Adams, M.J., Pearl, C.A., McCreary, B., Galvan, S.K., and Rowe, J.C., 2019, Oregon Spotted Frog (Rana pretiosa) Monitoring at Jack Creek 2015-2018 (final): U.S. Geological Survey data release, https://doi.org/10.5066/P9L2XC5B.*** This dataset contains information from mark-recapture surveys conducted in 2015 by USGS as part of an ongoing Oregon spotted frog (Rana pretiosa) monitoring effort at Jack Creek, Klamath County, Oregon. Data consist of spotted frog counts aggregated by date, location, life stage, and sex, as well data on environmental conditions at the time of each survey.
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Water-quality data for groundwater samples collected from 4,824 sites between 1991 through 2018, and ancillary data and information on sampled wells and principal aquifers, were used to assess the occurrence and distribution of strontium in U.S. groundwater from 32 principal aquifers. This data release includes one tab-delimited text file detailing these data. Table: Chemical data from the U.S. Geological Survey National Water Information System and ancillary data considered for assessment of strontium concentration in U.S. groundwater.
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Solid organic matter (OM) in sedimentary rocks produces petroleum and solid bitumen when it undergoes thermal maturation. The solid OM is a 'geomacromolecule', usually representing a mixture of various organisms with distinct biogenic origins, and can have high heterogeneity in composition. Programmed pyrolysis is a common conventional method to reveal bulk geochemical characteristics of the dominant OM while detailed organic petrography is required to reveal information about the biogenic origin of contributing macerals. Despite advantages of programmed pyrolysis, it cannot provide information about the heterogeneity of chemical compositions present in the individual OM types. Therefore, other analytical techniques...
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Zebra and quagga mussel veligers were exposed to eleven distinct cultures (isolates) of cyanobacteria representing Anabaena, Aphanizomenon, Dolichospermum, Microcystis, and Planktothrix species and the cyanotoxin microcystin to determine the lethality of cyanobacteria on dreissenid veligers. Six-day laboratory bioassays were performed in microplates using dreissenid veligers collected from the Detroit River, Michigan, USA. Veligers were exposed to increasing concentrations of cyanobacteria and microcystin using the green algae Chlorella minutissima as a control. Raw data were fit to dose response curves formulated from a Probit model to calculate LC50 values. This data release presents the raw data summarized and...
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Water velocities and discharge were measured in the lock chamber and immediately downstream of Brandon Road Lock on the Des Plaines River at river mile 286 on December 9-10, 2014 using Teledyne RDI Rio Grande 600 and 1200 kHz acoustic Doppler current profilers (ADCP). The data were georeferenced with a differential GPS receiver with submeter accuracy. These ADCP measurements were collected in support of the US Army Corps of Engineers Great Lakes and Mississippi River Interbasin Study (GLMRIS). Velocity measurements were processed using the Velocity Mapping Toolbox (Parsons and others, 2013) to derive temporally- and spatially-averaged water velocity values. Discharge measurements were processed with the QRev discharge...
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San Francisco Bay, California is considered a mercury-impaired watershed. Elevated concentrations of mercury are found in water and sediment as well as fish and estuarine birds. Sources of mercury to the watershed since 1845 include sediment-associated mercury from mercury mining, mercury losses from gold amalgamation activities in mines of the Sierra Nevada, aerial deposition of mercury from global and regional emissions to air, and the direct discharge of mercury to Bay waters associated with the urbanization and industrialization of the estuary. We assessed historical trends in mercury bioaccumulation by measuring mercury concentrations in feathers of the endangered California Ridgway’s rail (formerly California...
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These data consist of a multi-trophic, day vs. night, nearshore to offshore transect approach for data collection for this Cooperative Science and Monitoring Initiative effort at two northwestern Lake Huron sites near Hammond Bay and Thunder Bay, Michigan. Zooplankton and Mysis samples were collected monthly from April-October while benthos and prey fish samples were collected seasonally during Spring, Summer, and Fall. Invertebrate taxa (zooplankton, Mysis, benthic macroinvertebrates) were identified, enumerated, and measured using a dissecting microscope. Diet items of the prey fish were processed similarly to the other samples in terms of taxonomy. These data were used to calculate densities of fish prey items...
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This dataset describes irrigation water use in Kansas in 2015. Volumes of water used, irrigated area, and average irrigation application depths are provided for three sets of subareas: (1) Irrigation water use analysis regions that include Groundwater Management Districts (GMDs) with the areas outside of GMDs divided into eastern, central, and western Kansas; (2) Regional Planning Areas (RPAs), which are 14 areas determined by the Kansas Water Office based on hydrologic and administrative boundaries, each with a set of goals outlined in the Kansas Water Vision (https://kwo.ks.gov/water-plan/water-vision); and (3) the 105 Kansas counties. Volumes of water used, irrigated area, and average application depths are also...
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We developed and tested neural network-based models to recognize and count emigrating juvenile river herring in continuous video. Continuous video was collected from an underwater camera installed at Great Herring Pond in Bourne, Massachusetts (USA) between June and November 2017. Our algorithm extracts video frames to assess presence/absence of fish and count numbers of fish emigrating. We used extracted video frames to assess model performance. Provided datasets include information about extracted frames that were used for model assessment. This data release includes four datasets that were used to test model performance and select the best fitting model. (1) The “Model Evaluation Dataset” includes count and presence/absence...
The Integrated Ecosystem Model (IEM) for Alaska and Northwest Canada Project integrated existing models of vegetation, disturbance, and permafrost into one complete ecosystem model for the state of Alaska and Northwest Canada.The final synchronized model will integrate existing climate, vegetation, disturbance, hydrology, and permafrost models to improve understanding of potential landscape, habitat and ecosystem change. The project’s (September 1, 2011 through August 31, 2016) primary goal was to develop the IEM modeling framework to integrate the driving components for and the interactions among disturbance regimes, permafrost dynamics, hydrology, and vegetation succession/migration for Alaska and Northwest Canada....