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USGS scientists evaluated the utility of hidden Markov movement models to characterize seasonal movements of mule deer (Odecoileus hemionus) and pronghorn (Antilocapra americana) that were tracked with GPS collars in Wyoming, USA, during 2014-2021. Data include step lengths and turning angles for individual animals at daily time-steps throughout the tracking period. Models demonstrated distinct seasonal movements between species indicative of migratory behavior and enable analyses to identify influential factors that affect decisions to migrate by animals.
Categories: Data;
Tags: Ecology,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Wyoming,
animal behavior,
The data presented here are blacklegged tick nymph densities, white-tailed deer densities, and Borrelia burgdorferi (causative agent of Lyme disease) prevalences for eight national parks in the eastern United States from 2014-2022.
We developed and validated conventional and quantitative real-time PCR assays for the detection of DNA from the myxozoan parasite Tetracapsuloides bryosalmonae, the causative agent of proliferative kidney disease in fish. Assays were tested on fish tissue and on field-collected water samples to assess diagnostic and environmental DNA capabilities. The specificity, sensitivity, and broad applicability of the present assays surpass previous methods for detecting T. bryosalmonae DNA from fish tissue and water samples.
Positive and negative dreissenid mussel DNA quantitiative PCR results from environmental DNA water samples collected in Montana, Wisconsin and Minnesota to assess if environmental DNA can extend the seasonal window for dreissenid mussel early detection.
Categories: Data;
Tags: Flathead,
Missouri-Marias,
Pepin,
USGS Science Data Catalog (SDC),
Upper Mississippi,
Unpiloted aerial system (UAS) flight campaigns were conducted at two rangeland sites in Southwestern Montana during the 2018 growing season to classify vegetation and landcover types. A total of nine flights were conducted at the Argenta site and seven at the Virginia City site. To align images in space and time, we used four-dimensional structure from motion (4D SfM) and continued with processing for each flight date based on the full suite of images aligned for the entire growing season. We created dense point clouds, digital terrain models (bare earth), digital elevation models (including vegetation), and orthorectified images for each flight date at each site. We used the orthoimages to calculate the Normalized...
Remotely sensed elk locations were derived from satellite and Unmanned Aerial Systems (UAS) imagery collected during the winter of 2018 and the winter and spring of 2019 at the National Elk Refuge in Jackson, Wyoming and compared to locations from Global Positioning System (GPS) collars from 2017 - 2019. This data release provides the source, date, time, latitude, and longitude of elk locations and the type of analyses the location data were used for in the accompanying manuscript by Graves and others 2021. DOI will be provided once supplied by the journal.
Paleohydrologic records provide a valuable perspective on the variability of streamflow and hydroclimate that is critical for water resource planning and placing present day and future conditions into a long-term context. Until now, key insights gained from streamflow reconstructions in the other river basins across the Western U.S. have been lacking in the Milk and St. Mary River Basin. Here we utilize a new database of naturalized streamflow records for the Milk and St. Mary Rivers and an expanded network of tree-ring records from the region to reconstruct streamflow at eight gaging locations located in the mountains, foothills, and plains reaches of the basins. The network of streamflow reconstructions presented...
This data represents occupancy predictions for western bumble bee in 2020 across the western conterminous United States. This product is a 30-meter resolution downscaled version of previously published occupancy layers for the western bumble bee. For more information on original publications, see the publication listed in the Larger Works Cited Section.
Real-time PCR results of a round robin evaluation of 5 assays that target dreissenid mussel DNA. Water samples collected from waters with and without dreissenid mussels were analyzed using these five assays in four USGS laboratories. Samples from waters without dreissenid mussels were spiked with known amounts of dreissend DNA.
This data release contains molecular diagnostic results and molecular detection of the myxozoan parasite Tetracapsuloides byrosalmonae in fish tissue and environmental DNA samples collected from the inter-mountain West, USA.
USGS and NPS biologists used distance sampling to estimate abundance of hoary marmots (Marmota caligata) in North Cascades National Park, Washington, USA during 2007-2008 and 2016-2017. Biologists resurveyed hoary marmots in 2016 and 2017 at 78 point-count stations across 19 sites surveyed by NPS in 2007-2008. Data include marmot detection distances and survey conditions used to estimate abundances at each site in each year. Data also include estimated marmot abundances and covariates used to evaluate effects of weather, snowpack, and vegetative phenology and productivity on marmot abundances. Marmots are classified as adult, subadult, or juvenile for observations in which age was evident.
Categories: Data;
Tags: Ecology,
North Cascades National Park,
USGS Science Data Catalog (SDC),
Washington,
Wildlife Biology,
The shapefile contains the data necessary to recreate the analyses used in Jalbert et al., in review, Vulnerability of Pacific salmon to invasion of northern pike (Esox lucius) in southcentral Alaska. Specifically, users will be able to view 1) intrinsic potential model calculations for 5 Pacific salmonids (Chinook, chum, pink, sockeye, and coho salmon) and northern pike and 2) all parent nodes of the vulnerability model (human colonization, natural colonization, and habitat overlap) as well as their inputs. Finally, users are able to map vulnerability to invasion for each Pacific salmon species.
Wind energy represents an important alternative to oil and gas extraction to meet increasing energy demands, but it has the potential to disrupt wildlife populations. Because behavioral adjustments, such as altered habitat selection, are a primary way that long-lived species respond to novel disturbances, USGS scientists evaluated effects of wind energy development on pronghorn (Antilocapra americana) space use and habitat selection. Using data from GPS-collared female pronghorn in the Shirley Basin of south-central Wyoming, USA, we tested four potential effects of wind turbines on pronghorn space use during the summer and winter: 1) displacement away from wind turbines, 2) increase in size of home ranges, 3) short-term...
Categories: Data;
Tags: Energy Resources,
Shirley Basin,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Wyoming,
Yellow sweet clover (Melilotus officinalis; clover hereafter) is a biennial legume native to Eurasia that is now present in all 50 states. Clover can grow 2 m tall and achieve high densities across large areas in the Northern Great Plains when conditions are conducive, such as in 2019. Clover is highly efficient at fixing nitrogen in soils which reduces the abundance of native grasses, while simultaneously facilitating invasion of non-native grasses, which may alter fire regimes. In contrast, clover provides considerable forage for ungulates, attracts a wide variety of insects that, along with clover seeds, are important to waterfowl, gamebirds, and songbirds, and supports numerous pollinators. Little is known about...
USGS scientists evaluated movement and resource selection during seasonal migrations by pronghorn (Antilocapra americana) that were tracked with GPS collars near wind-energy facilities in the Shirley Basin, Wyoming, USA, in 2010-2012 and 2018-2020. Data include values of environmental variables and proximity to wind turbines at used and available locations for analyses of pronghorn selection of routes and resources within routes during spring, fall, and winter migrations. Data also include metrics of fidelity to migration routes and speed of migratory movements and environmental variables at each step of the migratory movement.
Categories: Data;
Tags: Ecology,
Energy Resources,
Shirley Basin,
USGS Science Data Catalog (SDC),
Wildlife Biology,
These data represents annual estimates of neonicotinoid nitroguanidine group insecticide application rates across the western conterminous United States from 2008 to 2014. This product contains seven raster layers (appearing as separate bands in a multi-band raster). Each band represents one year of the data beginning in 2008. Estimates are generated by pairing crop specific application rates of neonicotinoids with fine scale crop data obtained from the CropScape cropland data layer. Application units are kilograms per hectare. Further details on the methods used to generate this product are described in: Douglas, M.R., Baisley, P., Soba, S., Kammerer, M., Lonsdorf, E.V. and Grozinger, C.M., 2022. Putting pesticides...
USGS personnel surveyed bumble bees and flowering plants on private and public lands in Central Montana. These data provide a summary of what was found, including the number of bumble bees caught during standardized netting surveys and a comprehensive list of all plants in flower within survey plots during each site visit.
Categories: Data;
Tags: Botany,
Ecology,
Montana,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Tabular and raster data containing spatial capture recapture records for male and female bighorn sheep (Ovis canadensis nelsoni) in Grand Canyon National Park and surrounding landscape collected from 2010 to 2018 and associated tabular data files required for analysis of data with spatial capture connectivity models and raster data describing the ouput from SCR models. Associated tables and rasters include details for traps and genetic captures, and the state space for required modeling and associated spatial covariates in models, as well as rasters describing population density and habitat use.
U.S. Geological Survey decision analysts and technical experts worked with representatives from the U.S. Bureau of Reclamation, Utah Division of Wildlife Resources, and Central Utah Water Conservancy District to predict the consequences of alternative actions following environmental DNA detections of dreissenid mussel eDNA in Jordanelle Reservor, Utah. This dataset provides the consequence and model inputs for each of the alternative actions under different levels of uncertainty.
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Genetics,
Jordanelle Reservoir,
USGS Science Data Catalog (SDC),
The grizzly bear distribution boundary represents the estimated geographic extent of occupied range of the Yellowstone grizzly bear population for the period 2008-2022. The distribution boundary was delineated to provide reliable estimations of grizzly bear occupancy throughout time and for use as a monitoring tool in grizzly bear management and conservation.The boundary was delineated by the Interagency Grizzly Bear Study Team (IGBST) using an interpolation method based on grizzly bear VHF telemetry and GPS locations as well as verified observations and signs of grizzly bears inside the Greater Yellowstone Ecosystem during 2008 to 2022.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Beaverhead-Deerlodge,
Bridger-Teton,
Caribou-Targhee,
Custer-Gallatin,
Ecology,
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