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(i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: USGS Science Data Catalog (SDC),
Unites States of Ameica,
amphibian,
biota,
case definition,
These data were collected as part of a field trial to test the effectiveness of a sylvatic plague vaccine (see Rocke et al., 2017 for details). Vaccine and control plots were selected randomly from the available pairs at each location. Baits containing Rhodamine B, a biomarker, were distributed at each plot. At least 1 week and no more than 2 months post-baiting each year, local collaborators captured, marked, and sampled prairie dogs. Hair and whisker samples were collected from up to 50 unique prairie dogs from each plot each year. Sex, age, weight, and the identity of all current-year and prior-year recaptures were recorded for each captured animal. In the laboratory, hair/whiskers were assessed for the presence...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Arizona,
Awapa Plateau,
Buffalo Gap National Grasslands,
Cedar City,
Charles M. Russell National Wildlife Refuge,
A three-dimensional groundwater flow model using MODFLOW-NWT was developed to evaluate historical and potential stream capture in the lower Humboldt River Basin, Nevada. The Humboldt River Basin is the only river basin that is contained entirely within the state of Nevada. The effect of groundwater pumping on the Humboldt River is not well understood. Tools are needed to determine stream capture and manage groundwater pumping in the Humboldt River Basin. Previous work has demonstrated that the river’s surface-water resource is sensitive to groundwater withdrawals, which have steadily increased since the 1950s for agriculture, municipal, and mining uses. A numerical groundwater flow model was developed for the purpose...
Categories: Data Release - Revised;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Capture,
Groundwater Model,
Humboldt River Basin watershed,
Hydrology,
InlandWaters,
This data release contains monthly 270-meter resolution Basin Characterization Model (BCMv8) climate and hydrologic variables for Localized Constructed Analog (LOCA; Pierce et al., 2014)-downscaled Global Climate Models (GCMs) for Representative Concentration Pathway (RCP) 4.5 (medium-low emissions) and 8.5 (high emissions) for hydrologic California. The 20 future climate scenarios consist of ten GCMs with RCP 4.5 and 8.5 each: ACCESS 1.0, CanESM2, CCSM4, CESM1-BGC, CMCC-CMS, CNRM-CM5, GFDL-CM3, HadGEM2-CC, HadGEM2-ES, and MIROC5. The LOCA climate scenarios span water years 1950 to 2099 with greenhouse-gas forcings beginning in 2006. The LOCA downscaling method has been shown to produce better estimates of extreme...
These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: California,
Ecology,
Marin County,
Point Reyes National Seashore,
USGS Science Data Catalog (SDC),
This dataset contains all the layers associated with U.S. Geological Survey (USGS) Great Lakes Coastal Wetland Restoration Assessment (GLCWRA) initiative for the Upper Peninsula Restoration Assessment (UPRA) which aims to identify and rank coastal areas with the greatest potential for wetland habitat restoration. Each layer has a unique contribution to the identification of restorable wetlands. The 7 parameters (Parameter 0: Mask, Parameter 1: Hydroperiod, Parameter 2: Wetland Soils, Parameter 3: Flowlines, Parameter 4: Conservation and Recreation Lands, Parameter 5: Impervious Surfaces, and Parameter 6: Land Use) and Index Composite directly correlate to areas that are recommended for restoration. The dikes, degree...
Categories: Data Release - Revised;
Types: GeoTIFF,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Chippewa,
Great Lakes,
Holocene,
Lake Huron,
Lake Michigan,
RBRduo pressure and temperature sensors, mounted on aluminum frames, were moored in shallow (< 6 m) water depths in Skagit and Bellingham Bays, Washington, USA, from December 2017 to February 2018, to capture wave heights and periods. Continuous pressure fluctuations are transformed into surface-wave observations of wave heights, periods, and frequency spectra at 30-minute intervals.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: CMGP,
Coastal and Marine Geology Program,
Marine Geology,
Oceans,
PCMSC,
This data release presents beach topography and nearshore bathymetry data from repeated surveys in northern Monterey Bay, California to document changes in shoreline position and coastal morphology as they relate to episodic (storms), seasonal, and interannual and longer (e.g. El Niño) processes. The ongoing monitoring program was initiated in October 2014 with semi-annual surveys performed in late summer (September or October) and Spring (March). Nearshore bathymetry and topography data were collected along a series of shore-perpendicular transects spaced primarily at 50-250 m intervals between Santa Cruz and Moss Landing, California (fig. 1). The transects were located along sandy stretches of the coastline...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Bathymetry and Elevation,
CMGP,
Coastal and Marine Geology Program,
Echo Sounders,
GPS (Global Positioning System),
We characterized seafloor sediment conditions near the mouth of the Elwha River from underwater photographs taken every four hours from September 2011 to December 2013. A digital camera was affixed to a tripod that was deployed in approximately 10 meters of water (Tripod location from September 2011 to April 2013: 48.15333, -123.55931; tripod location from April 2013 to December 2013: 48.15407, -123.55444). Each photograph was qualitatively characterized as one of six categories: (1) base, or no sediment; (2) low sediment; (3) medium sediment; (4) high sediment; (5) turbid; or (6) kelp. For base conditions, no sediment was present on the seafloor. Low sediment conditions were characterized by a light dusting of...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Clallam County,
Elwha River,
Olympic Peninsula,
Remote Sensing,
State of Washington,
The U.S. Geological Survey in cooperation with the Grand River Dam Authority completed a high-resolution multibeam bathymetric survey to compute a new capacity and surface-area table. The capacity and surface-area tables describe the relation between the elevation of the water surface and the volume of water that can be impounded at each given water-surface elevation. The capacity and surface area of Grand Lake O’ the Cherokees were computed from a Triangular Irregular Network (TIN) surface created in Global Mapper Version 21.0.1. The TIN surface was created from three datasets: (1) a multibeam bathymetric survey of Grand Lake O’ the Cherokees in 2019 (Hunter and others 2020), (2) a 2017 USGS bathymetric survey...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Raster,
Shapefile;
Tags: Bathymetry,
Bathymetry and Elevation,
Bathymetry and Elevation,
Grand Lake O' the Cherokees,
Oklahoma,
This dataset contains absolute-gravity data collected by the USGS Southwest Gravity Program, a collaborative effort of the Arizona, California, and New Mexico Water Science Centers to monitor and model groundwater-storage change. Data were collected following the methods in "Procedures for Field Data Collection, Processing, Quality Assurance and Quality Control, and Archiving of Relative and Absolute-Gravity Surveys", U.S. Geological Survey Techniques and Methods book 2, chapter D4 . All data are reviewed and approved. Additional gravity data, including network-adjusted relative- and absolute-gravity data, may be available in ScienceBase Data Releases.Gravity data are provided as two files:sgp_agdb_stations_YYYY-MM-DD.csv...
This U.S. Geological Survey data release consists of a geospatial dataset containing information on estimated streamflow extent, stream velocity, and stream depth at Soldier Meadows Black Rock Desert - High Rock Canyon Emigrant Trails National Conservation Area, Nevada, and the data acquired and processed to support the estimation of those attributes. Supporting datasets include topographic survey data collected using a global navigation satellite system (GNSS) in Soldier Meadows from August 13-15, 2019, and an archive of the two-dimensional hydraulic model used to generate a polygon dataset for streamflow extent as well as raster datasets for stream velocity, and stream depth. The data release includes: 1) a polygon...
Model archive summary (MAS) describing the development of a suspended-sediment concentration (SSC) surrogate regression model for the Hookton Slough near Loleta, CA water quality station (USGS site ID# 404038124131801). A continuous 15-minute SSC record was computed using this regression model for the period of record (03-04-2016 to 09-10-2019). The computed SSC record can be found on NWIS Web at https://waterdata.usgs.gov/ca/nwis/uv?site_no=404038124131801. The SSC record was used to assess ambient SSC conditions, the availability of suspended sediment to support surface deposition and elevation gain in adjacent salt marshes, and to characterize salt marsh resiliency to climate change impacts in Humboldt Bay, CA.
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Hookton Slough,
Humboldt Bay,
U.S. Geological Survey,
USGS,
A site in north eastern MI, Oscoda Township, has some of the highest recorded exposure in birds to perfluorinated substances (PFASs) in the U.S. Some egg and plasma concentrations at that location exceeded the lowest reproductive effect threshold established for two avian laboratory species. The objectives of this study were to determine whether there were reproductive effects or physiological responses in a model bird species, the tree swallow (Tachycineta bicolor), associated with this extremely high exposure to PFASs. The lack of exposure above background to other contaminants at this site allowed for an assessment of PFAS effects without the complication that responses may be caused by other contaminants. A...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Clarks Marsh, Oscoda, Michigan, USA,
Oscoda, Michigan, USA,
PFOS,
Perfluorinated chemicals,
USGS Science Data Catalog (SDC),
This metadata record contains 6 tables used to assess sources of Polychlorinated Biphenyls (PCB) in the Back River watershed, Baltimore City, Maryland. Included in the dataset are PCB concentrations of surface water and porewater passive samplers from Herring Run, Moores Run, tidal Back River, and Back River Wastewater Treatment Plant; PCB concentrations of bed sediments and other solids, Fat, Oil, and Grease (FOG) samples, and road sediments; dissolved organic carbon (DOC), total suspended solids (TSS), and particulate organic carbon (POC) concentrations of grab samples; and PCB concentrations of passive samplers from pump stations collected in 2018-2020.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Back River,
Back River Wastewater Treatment Plant,
Back River Watershed,
Baltimore City,
Environmental Health,
Intracoelomic implantation of electronic tags has become a common method in fishery research, but rarely are fish examined by scientists after release to understand the extent that surgical incisions have healed. Walleye (Sander vitreus) are a valuable, highly-exploited fishery resource in the Laurentian Great Lakes. Here, fishery capture of walleye with internal acoustic transmitters combined with a high reward program provided multiple opportunities to examine photographs and quantify the status of surgical incisions. Walleye (n=926) from reef and river spawning populations in Lake Erie and Lake Huron were implanted with acoustic transmitters during spring spawning events from 2011 to 2016. Incisions were closed...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Detroit,
Lake Huron,
Lower Maumee,
Plant and animal tagging,
Sandusky,
California's Central Valley ranges from the mountain fronts toward a central trough, mainly defined by the San Joaquin and Sacramento Rivers, and the relative distance from trough to valley edges is of interest. This data release provides supplemental data for the USGS Professional Paper 1766, titled Groundwater Availability of the Central Valley Aquifer, California and provides geographic information systems (GIS) datasets containing this relative distance grid and supporting data. Included in this data release are shapefiles used to define the Central Valley study area, the Central Valley trough, and a relative distance grid that may be used to spatially define other GIS data into zones between the edge of the...
This topobathymetric digital elevation model (TBDEM) mosaic represents the topography and bathymetry for the Milwaukee River Estuary in Milwaukee, Wisconsin and adjacent terrestrial and Lake Michigan nearshore coastal areas. The TBDEM was produced in support of modeling and for developing a physical habitat framework to help with understanding the effects from multidirectional currents and seiche effects associated with the mixing of river flows with Lake Michigan backwater. The TBDEM mosaic is built off existing terrestrial, nearshore, and estuary frameworks developed for other areas around the Great Lakes and the Milwaukee River Harbor. Ranging from 2008-2015, land elevations derived from lidar and historic topographic...
Research and surveillance reports have documented a significant increase in coal workers' pneumoconiosis, including the most severe forms of progressive massive fibrosis and rapidly progressive pneumoconiosis in U.S. coal miners, particularly those in Appalachian coalfields. Several possible explanations for these observations include excessive exposures to total respirable dust, increased exposure to freshly fractured silica and silicates, or greater exposure to smaller particles that may be the result of changing mining practices. This dataset contains the chemical and morphological characteristics of particulate matter retrieved from lung tissue slices of historical and contemporary miners.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Appalachia,
Environmental Health,
GGGSC,
Geochemistry,
Geology, Geophysics, and Geochemistry Science Center,
This dataset includes photographic images of thin sections made from xenolith samples collected from the Sliderock Mountain and Susie Peak plutons, Montana, along with a shapefile representing the locations of the samples. The plutons are located north of the Stillwater Complex, Montana, which is exposed along the northern side of the Beartooth Mountains in Montana. To the north of the Stillwater Complex, a gravity anomaly is located where Phanerozoic rocks may unconformably overlie the complex. These Phanerozoic rocks are intruded by Cretaceous plutons that have gabbroid inclusions that resemble other metamorphosed rocks of the Stillwater Complex. Samples of the inclusions were collected, and thin sections were...
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