Filters: System Type: Data Release (X) > Categories: NOT Data Release - In Progress (X) > Tags: {"type":"USGS Scientific Topic Keyword","name":"aquatic biology"} (X) > Tags: {"type":"USGS Scientific Topic Keyword","name":"ecology"} (X)
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These data describe the catch and biological data from 363 bottom-set gill-net lifts distributed throughout Lake Michigan (including main basin and Green Bay) between April and November in 1930–1932. Data collected from the R/V Fulmar were recorded in notebooks and are now archived at the U.S. Geological Survey’s Great Lakes Science Center. Each lift included 1–7 gangs of linen gill nets. Each gang comprised 3–5 panels each having a length of 155 m, a height of 1.5 m, and a (stretch-)mesh size of either 60, 64, 67, 70, or 76 mm. The digitization of the Fulmar data notebooks was started in the late 1990s and finished in this study.
These data were compiled for a manuscript in which 1) we develop a water temperature model for the major river segments and tributaries of the Colorado River basin, including the Colorado, Green, Yampa, White, and San Juan rivers; 2) we link modeled water temperature to fish population data to predict the probability native and nonnative species will be common in the future in a warming climate; and 3) assess the degree to which dams create thermal discontinuity in summer in river segments across the western US. Per goal #1, we developed a water temperature model using data spanning 1985-2015 that predicts water temperature every 1 mile (1.6-km) in rivers both now and in the future due to the potential influence...
These data represent capture histories for humpback chub (Gila cypha) that spawn in the Little Colorado River (LCR) from 2009-2017. Capture histories pertain to size class (<150mm total length [TL], 150-199mm TL, 200-249mm TL, and >250mm TL) and spatial location (the juvenile chub monitoring [JCM] reach in the Colorado River [63.4-65.0 river miles downstream of Lees Ferry], lower LCR [0-13.56 km upstream of Colorado River confluence], and upper LCR [13.57-17.9 km upstream of Colorado River confluence]).
Zebra and quagga mussel veligers were exposed to eleven distinct cultures (isolates) of cyanobacteria representing Anabaena, Aphanizomenon, Dolichospermum, Microcystis, and Planktothrix species and the cyanotoxin microcystin to determine the lethality of cyanobacteria on dreissenid veligers. Six-day laboratory bioassays were performed in microplates using dreissenid veligers collected from the Detroit River, Michigan, USA. Veligers were exposed to increasing concentrations of cyanobacteria and microcystin using the green algae Chlorella minutissima as a control. Raw data were fit to dose response curves formulated from a Probit model to calculate LC50 values. This data release presents the raw data summarized and...
This data release links benthic macroinvertebrate sites to both the NHDPlus Version 2 and NHDPlus High Resolution Region 02 networks, hereafter referred to as V2 and HR, using the hydrolink methodology. Linked benthic macroinvertebrate sites are those included in the Chesapeake Bay Basin-wide Index of Biotic Integrity (Chessie BIBI) developed by the Interstate Commission on the Potomac River Basin (ICPRB) and available from the Chesapeake Bay Program (https://datahub.chesapeakebay.net/LivingResources). The data set contains a unique sample identifier created by ICPRB, survey program, coordinates of sample, linked V2 COMID and HR Permanent Identifier, and information regarding uncertainty in the attribution. We strongly...
Categories: Data;
Tags: Aquatic Biology,
District of Columbia (national district),
Ecology,
Hydrology,
Maryland (state),
These data were compiled to create models that estimate entrainment rates and population growth rates of smallmouth bass below Glen Canyon Dam. Objective(s) of our study were to predict smallmouth bass entrainment rates and population growth under different future scenarios of Lake Powell elevations and management. These data represent parameters needed for associated models and data needed to produce figures. These data were collected from publicly available online sources including published papers and federal government datasets. These data were assembled by researchers from U.S. Geological Survey, Utah State University, Colorado State University, U.S. Fish and Wildlife Service. These data can be used to run...
This dataset includes hourly stream temperature data for 139 temperature logger sites throughout the Lahontan Basin Region of Northern Nevada and Eastern California. Data loggers were part a study beginning in 2017, with data available through 2019 for most locations. The spatial data layer contains site locations, geographic information, data summaries, mean August stream temperatures, and modeled NorWeST stream temperatures. The Wet-Dry delineation file contains daily flow status estimates derived from stream temperature data for each site. The Site Visit file contains the date and time of the site visit along with associated information on site flow conditions, water depths, logger conditions, and stream logger...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Aquatic Biology,
California,
Ecology,
Hydrology,
Intermittent,
These data consist of a multi-trophic, day vs. night, nearshore to offshore transect approach for data collection for this Cooperative Science and Monitoring Initiative effort at two northwestern Lake Huron sites near Hammond Bay and Thunder Bay, Michigan. Zooplankton and Mysis samples were collected monthly from April-October while benthos and prey fish samples were collected seasonally during Spring, Summer, and Fall. Invertebrate taxa (zooplankton, Mysis, benthic macroinvertebrates) were identified, enumerated, and measured using a dissecting microscope. Diet items of the prey fish were processed similarly to the other samples in terms of taxonomy. These data were used to calculate densities of fish prey items...
We developed the North American Freshwater Migratory Fish Database (NAFMFD) that synthesizes current knowledge of migratory status, pattern, and behavior for native and non-native freshwater fish species throughout North America, including 1,241 species representing 79 families and 322 genera.
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Ecology,
USGS Science Data Catalog (SDC),
farming,
This Data Release contains field topo-bathymetric survey data in a selected saltmarsh shoreline along Gandys Beach, New Jersey, where constructed oyster reefs (CORs, aka oyster castles) were installed to protect the shoreline and enhance habitat for oyster and other species. Oyster castles were constructed as a part of a living shoreline project along Gandys Beach in 2016 in response to the damage by Hurricane Sandy in 2012. Wave, current and sediment data were collected, and field topographic and bathymetric surveys were conducted from January 2018 to April 2018. Fine resolution topographic and bathymetric data is needed to assess shoreline structure effectiveness in terms of wave and current energy reduction,...
Ecological models facilitate the evaluation and assessment of alternative approaches to restore the Greater Everglades ecosystem. Joint Ecosystem Modeling (JEM) provides ecological models tailored to address specific management issues. The multi-agency REstoration, COordination and VERification (RECOVER) science team uses ecological models (i.e., ecological planning tools) to evaluate the potential effects of projects in the Comprehensive Everglades Restoration Plan (CERP) on natural resources. The planning agencies and bureaus involved in CERP desire to also use these ecological planning tools for the evaluation of alternative water control plans to be performed by the Lake Okeechobee System Operating Manual (LOSOM)...
Ecological models facilitate the evaluation and assessment of alternative approaches to restore the Greater Everglades ecosystem. Joint Ecosystem Modeling (JEM) provides ecological models tailored to address specific management issues. The multi-agency REstoration, COordination and VERification (RECOVER) science team uses ecological models (i.e., ecological planning tools) to evaluate the potential effects of projects in the Comprehensive Everglades Restoration Plan (CERP) on natural resources. The planning agencies and bureaus involved in CERP desire to also use these ecological planning tools for the evaluation of alternative water control plans to be performed by the Lake Okeechobee System Operating Manual (LOSOM)...
A subset of the Louisiana's 2017 Coastal Master Plan model output was used to estimate the potential climate mitigation role of Louisiana’s coastal area. Model output of surface water salinity, land/water classification, and area of eight habitats for elapsed years of 6, 11, 16, 26, and 36 were post-processed to estimate habitat areas at years of 2020, 2025, 2030, 2040, and 2050, that align with the Governor of Louisiana’s greenhouse gas reduction targets. In addition, the Louisiana coastal boundary and a static mask of upland and developed area were used to define the coastal area. The modeled habitat areas with literature review of net ecosystem carbon balance fluxes per habitat were used in an analytical framework...
Coastal management decisions are complex and include challenging tradeoffs. Decision science offers a useful framework to address such complex problems. We illustrate the process with several coastal restoration studies. Our capstone example is based on a recent barrier island restoration assessment project at Dauphin Island, Alabama, which included the development of geomorphological and ecological models that forecast environmental changes over a 10 year time period from 2015 to 2025. The proposed framework aims to serve as a tool to assist coastal managers with the process of restoration. Specifically, we discuss the importance of considering concepts and techniques from ecology, coastal geology, geomorphology,...
Categories: Data;
Tags: Adaptive Management,
Aquatic Biology,
Barrier Island,
Climatology,
Dauphin Island, Alabama,
We used a combination of stable isotope analysis of carbon and nitrogen values in nesting loggerhead sea turtle samples to describe the foraging area used by each turtle. Here we present the stable isotope values for United States Geological Survey (USGS) turtles sampled in the remote Dry Tortugas National Park, south Florida, and their assigned foraging area.
Categories: Data;
Tags: Aquatic Biology,
Dry Tortugas National Park,
Ecology,
Loggerhead,
Stable Isotopes,
Bullseye snakehead, Channa marulius, was first detected in 2000 in the southern Florida town of Tamarac and has been expanding its geographic range. Environmental DNA (eDNA) analysis is a newly-developed technique used to non-invasively detect cryptic or low-density species, or those that are logistically difficult to study. Genetic material shed into the environment through tissue and body fluids is concentrated from water samples and analyzed for the presence of target species eDNA. To help delineate bullseye snakehead’s geographic range, we developed and validated a species-specific eDNA assay for both quantitative and droplet digital PCR (ddPCR). We then used ddPCR to assess 16 locations in southeast Florida...
These are metadata related to the collection of samples on the FK190612 research expedition in the north Pacific Ocean along the Cascadia margin in June 2019. Samples were collected to examine characteristics of methane emissions from seafloor seeps at the edge of hydrate stability and the associated communities.
Ecological models facilitate evaluation and assessment of alternative plans for restoring the Greater Everglades ecosystem. Modeling outputs were used in evaluations of alternative water control plans to be performed by the Combined Operational Plan (COP). The models used were: (1) Cape Sable Seaside Sparrow Marl Prairie Indicator in conjunction with (2) Cape Sable Seaside Sparrow Helper, (3) Florida apple snail (native) population model (EverSnail), (4) Wader Distribution Evaluation Modeling (WADEM), (5) Small-sized freshwater fish density, and (6) Alligator production probability (i.e., habitat suitability index (HSI)). These ecological models are used to examine potential impacts on the above listed flora and...
In this report, we evaluate this hypothesis for croaking gourami Trichopsis vittata, a non-native species that has established a reproducing population, but has not successfully spread beyond its very small (5 km2) range. We suspected the inability of T. vittata to colonize new habitats may be due to biotic resistance by the native eastern mosquitofish Gambusia holbrooki.
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Loxahatchee,
USGS Science Data Catalog (SDC),
nonindigenous species
Acanthurid surgeonfishes are an abundant and diverse group of herbivorous fishes on coral reefs. While their contribution to trophic linkages and dynamics in coral reef systems has received considerable attention, the role of linkages involving their parasites has not. As both consumers of fish tissue and prey to microcarnivores, external parasites can play a significant role in trophic transfer between the primarily algae-based food source and the broader coral reef community. Stable isotope analysis is a common tool for studying trophic linkages, which can be used for studies involving parasites. These data were collected to examine the stable isotope ecology (13C and 15N) of copepod (Caligus atromaculatus) and...
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Ecology,
USGS Science Data Catalog (SDC),
Virgin Islands of the United States,
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