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Background Deoxyribonucleic acid (DNA) is the hereditary material in organisms that contains the biological instructions for building and maintaining them. The chemical structure of DNA is the same for all organisms, but differences exist in the order of the DNA building blocks, known as base pairs. Unique sequences provide a means to identify individual species and detect their presence within aquatic or terrestrial environments. Environmental DNA (eDNA) is nuclear or mitochondrial DNA that is shed from an organism into the environment. Sources of eDNA include feces, mucous, and gametes; shed skin; and carcasses. In aquatic environments, eDNA is diluted and distributed by currents and other hydrological processes....
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Problem - In August 2000, eleven sites were sampled from 9 streams within the Croton watershed for pharmaceuticals and other organic compounds associated with wastewater as part of a national study of these compounds in streams receiving wastewater discharges. Results from the national study indicated that streams in the Croton Reservoir downstream of sewage treatment plants had concentrations of target compounds. Detected compounds included pharmaceuticals, detergent degradates, insecticides, caffeine, and other organic compounds (Kolpin and others, 2002). The results indicate that these compounds are commonly present in streams below wastewater treatment plants (WWTPs). Many of these compounds have not been...
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Water-quality samples were collected from the Upper Delaware Scenic and Recreational River (UPDE) and its tributaries during the period October 1, 2005, to September 30, 2007, to document existing water quality, determine relations between land use and water quality, and identify areas of water-quality concern. A tiered water-quality monitoring framework was used, with the tiers consisting of intensively sampled sites, gradient sites representing the range of land uses present in the basin, and regional stream-survey sites. Median nitrate and total phosphorous concentrations were 1.15 and 0.01 milligrams per liter (mg/L) for three sites on the mainstem Delaware River, 1.27 and 0.009 mg/L for the East Branch Delaware...
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Summary The Environmental Protection Agency’s (EPA) Long Term Monitoring (LTM) network has supported the collection of stream chemistry data in the Catskills since the 1990s. Trends in stream chemistry have periodically been evaluated in these streams but the most recent assessments only extend through the early 2000s. An updated assessment of stream chemistry trends will help evaluate the effects of recent substantial declines in acid deposition during the last decade. This study will evaluate changes in surface water chemistry from 1991 through 2013 at 5 stations in the Neversink and Rondout watersheds in the Catskill Mountains of New York. The results will be compared to changes in atmospheric deposition...
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This project provides weekly wet-only mercury deposition samples at the Mercury Deposition Network (MDN) station in the Biscuit Brook watershed at the Frost Valley YMCA. The station has been in operation since 2004 and is currently funded by New York State Energy Research and Development Authority (NYSERDA). This is the only MDN station located in the Catskill Mountains and one of only 3 stations in New York State. The Catskill Mountains supply 85% of New York City’s drinking water through a system of surface water reservoirs. All of these reservoirs have fish consumption advisories because of the high level of mercury (Hg) in fish in the reservoirs and atmospheric Hg deposition is the main source of Hg to the...
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Introduction As a result of storage and disposal practices at a former Manufactured Gas Plant, or MGP, in Bay Shore, NY, a variety of polycyclic aromatic hydrocarbons (PAHs) have been detected at high concentrations in the surficial, upper glacial aquifer of Long Island. Levels of PAHs initially detected over 10 years ago were in the parts-per-thousand range within a groundwater contaminant plume. The plume extended over a half-mile from MGP-related sources to discharge at a local estuarine tributary, Lawrence Creek, resulting, resulting in malodorous hydrocarbon sheens in this tributary and nearby storm drains. These signs of contamination revealed a larger underlying problem and prompted calls by state and local...
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Problem - Acidic precipitation has affected forested and aquatic ecosystems in New York, particularly in the Adirondack and Catskill regions. Acidification of surface waters and deleterious effects on fish and other biota have been well documented in both these regions. Despite reduced levels of acidity in atmospheric deposition over the past 20 years across New York and the northeastern United States, the most acid-sensitive streams and lakes have not yet begun to recover, and many show continued declines in acid-neutralizing capacity, an indicator acid-base status. Many studies have documented the effects of acid precipitation in New York, but thus far, there has been no comprehensive effort to synthesize and...
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Problem Over the past century, the Harlem River watershed has become highly urbanized with 90 percent of the waterway constrained by infrastructure, which has limited access for recreational use. Bound by New York (Manhattan) and Bronx Counties, the Harlem River is a tidal strait between urbanized estuaries to the north (Hudson River) and south (East River). Direct inputs include the more than 50 combined sewer overflows (CSOs) that discharge runoff from impervious surfaces and untreated sewage to the Harlem River during precipitation events. Historic uses of the Harlem River included swimming, boating, and fishing, as well as horseback riding and hiking through adjacent parklands. As urban sprawl continued...
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Background: The USGS propose a collaborative investigation with the NYSDEC and NOAA to evaluate the current condition of benthic macroinvertebrate communities and toxicity of bed sediments in the Niagara River Area of Concern (AOC). Using a probabilistic study design, sediment-toxicity data compiled by the USGS, invertebrate community data collected by NYSDEC, and sediment-chemistry data collected by NOAA will be assimilated using a Sediment Quality Triad approach (Chapman et al., 1992; USEPA, 1992) to provide a sediment-quality baseline needed to gauge changes expected to follow remediation of contaminated sediments in parts of the AOC. These data will also be used directly to confirm that the macroinvertebrate...
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The growth of temperate forests is typically limited by the availability of nitrogen. Elevated concentrations of nitrate in some Catskill Mountain streams, which are tributary to New York City's water-supply reservoirs west of the Hudson River, indicate that the forests of this region are at the early stages of nitrogen saturation. That is, nitrogen is available in excess of the amount utilized by vegetation and soil microorganisms in the forests. Nitrogen saturation is a concern because the mobile nitrate that moves through soil is accompanied by other nutrients such as the base cations calcium and magnesium that are necessary for forest growth but are present in short supply in some Catskill soils. And, nutrient...
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The Ellison Park wetland, a 423-acre, predominantly cattail marsh at the mouth of Irondequoit Creek in Monroe County near Rochester, N.Y., was evaluated for its potential role to decrease phosphorus loads that are derived from a 151-square-mile largely urbanized area and that ultimately enter and exacerbate efforts to ameliorate the eutrophic conditions in Irondequoit Bay. Monroe County's water-quality management plan included (1) modification of flow patterns upstream from and within the wetland by diverting storm runoff into backwater areas of the wetland, and (2) construction of a flow-control structure midway through the wetland that would cause short-term rises in water levels and increased dispersion of...
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The overall goal of this project has been the development of forest health and sensitivity indicators and “1st-generation” maps of potential sensitivity to disturbance for lands within watersheds of the NYC water supply in the Catskill Mountains of New York. The methodologies and data layers created in this effort can now be used to aid management decisions and help determine the extent and magnitude of terrestrial and aquatic responses to acidic deposition. The data products derived from this effort have been produced and documented in such a manner that stakeholders can now use these products for site evaluation as well as to perform more extensive analysis on the suite of readily available GIS and image-based...
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Problem - The New York City Department of Environmental Protection (NYCDEP) Stream Management Program, in cooperation with local Soil and Water Conservation Districts, is implementing stream-restoration demonstration projects to decrease channel bed and bank erosion and improve water quality (lower suspended sediment and turbidity) in several priority streams of the Catskill Mountain Region (Fig. 1). A variety of issues relating to (a) the hydraulic geometry of stable and unstable stream channels, (b) validation of underlying assumptions used to characterize channel stability and design, and (c) the effects of restoration on stream-channel geomorphology, stability, biota, and sediment transport have not been...
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American Eel (Anguilla Rostrata) Background The U.S. Geological Survey (USGS) has worked in cooperation with The Nature Conservancy (TNC) over the past 11 years to study the effects of channel geomorphology and impoundments on the distribution of common and rare mussels in the Neversink River and to characterize fish assemblages in tributaries to the Upper Delaware River in New York, Pennsylvania, and New Jersey. The focus of this research and monitoring program has recently shifted toward studies of the rapidly declining American eel (Anguilla rostrata) populations in rivers of the tri-state region. There are many factors that could potentially cause the observed declines in local and continental populations of...
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Problem Almost 1900 public, private, and commercial waste-water treatment plants (WWTPs), many located upstream of drinking water intakes or within tributaries to water-supply reservoirs, are permitted to release effluents into surface- or ground-waters across New York State. More than 150 facilities have New York State SPEDES permits to discharge waste waters in the New York City East of Hudson and West of Hudson Water Supply Watersheds (NYC Watersheds), which provide drinking water to more than nine million people in and around New York City. Some common waste water treatment plant (WWTP) contaminants (e.g., polycyclic musks, alkylphenols, and estradiol) can cause estrogenic or androgenic changes in the reproductive...
Categories: Data, Project; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Biogeochemical and Hydrologic Assessment, Biogeochemical and Hydrologic Assessment, BiogeochemicalandHydrologicAssessment, Completed, Contaminants, Emerging, All tags...
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The distribution of mercury (Hg) and sites of greatest Hg methylation are poorly understood in Catskill Mountain watersheds. Although concentrations of Hg in the water column are low, high concentrations of Hg in smallmouth bass and walleye have led to consumption advisories in most large New York City reservoirs in the Catskill Mountains. Mercury in natural waters can exist in many forms, including gaseous elemental mercury (Hg0), dissolved and particulate inorganic forms (Hg(II)), and dissolved and particulate methylmercury (MeHg). Most Hg in living organisms is MeHg, a highly neurotoxic form that bioaccumulates in aquatic food webs. The production of MeHg by methylation of inorganic Hg in the environment...
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Problem Samples were collected from 10 Key Point sites in the New York City Reservoir system as part of the cooperative USGS-New York State Department of Environmental Conservation (NYSDEC) statewide pesticide monitoring project ( Phillips and others, 2000). Ten pesticides were detected in the key-point samples collected between January 1999 and September 2000 - the herbicides atrazine, metolachlor, simazine and prometon, the herbicide degradates deethylatrazine, hydroxyatrazine, alachlor ethanesulfonic acid (ESA), metolachlor ESA, and metolachlor oxanilic acid (OA), and the insecticide diazinon. Concentrations for most of these detections were generally low (between 0.001 and 0.05 ug/L), with the exception of...
Categories: Data, Project; Types: Downloadable, Map Service, OGC WFS Layer, OGC WMS Layer, Shapefile; Tags: Biogeochemical and Hydrologic Assessment, Biogeochemical and Hydrologic Assessment, BiogeochemicalandHydrologicAssessment, Completed, Contaminants, Emerging, All tags...
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Background: The USGS propose a collaborative investigation with the NYSDEC to evaluate the current condition of benthic macroinvertebrate communities and toxicity of bed sediments in the Eighteenmile Creek Area of Concern (AOC). Sediment-toxicity data provided by the USGS and benthic-community data provided by the NYSDEC from inside the AOC will be compared to similar data from non-AOC sites in Eighteenmile Creek or nearby reference streams (of comparable drainage areas) to determine if the benthos-BUI (Beneficial-Use Impairment) designation is appropriate or if the BUI could be removed in Eighteenmile Creek. The remainder of this pre-proposal addresses only the direct USGS (sediment toxicity assessment) contribution...
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BackgroundDetailed investigations of mercury cycling and bioaccumulation have been done in the Upper Hudson River basin (upstream of the Hudson River near Newcomb, in New York's Adirondack Mountains, with a focus on the Fishing Brook sub-basin, part of the western headwaters of the Hudson River. This study is part of a National mercury study that includes a concurrent study of McTier Creek, a headwater sub-basin of the Edisto River, located in South Carolina's Coastal Plain. These two study areas provide contrasting and complementary settings for the study of mercury cycling and bioaccumulation in headwater streams with close connectivity to out-of-channel wetlands. Atmospheric deposition is the dominant source...
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BACKGROUND Air emissions from the combustion of fossil fuels in electrical power plants, building heating systems and vehicles are the major source of gaseous sulfur (SOx) and nitrogen (NOx) oxides in the atmosphere. These oxides dissolve in atmospheric moisture forming ions which are deposited by rain, snowfall and dust particles as acidic deposition. Acidic deposition releases soluble aluminum from the soil which can reach toxic concentrations in adjacent water bodies such as streams and wetlands. Acidic deposition also removes important nutrients such as calcium, potassium and magnesium from the soil negatively impacting local flora and fauna. Depletion of calcium combined with excess aluminum makes forest...


map background search result map search result map Water Quality of the Upper Delaware Scenic and Recreational River and Tributary Streams, New York and Pennsylvania Mercury concentration in water, sediment, and fish in the Neversink watershed, New York Estrogenicity in Streams of New York State Geomorphology, Biology, & Stability of Catskill Mountain Streams, New York Assessing American Eel Populations in Tributaries to the Upper Delaware River Balancing Wetland Functions in an Urban Setting -- Water-Quality Improvement and Habitat Preservation, Ellison Park Wetland, Monroe County, New York Assessment of Regional Forest Health and Stream and Soil Chemistry Using a Mulit-Scale Approach and New Methods of Remote Sensing Interpretation in the Catskill Mountains of New York An Integrated Assessment of the Recovery of Surface Waters from Reduced Levels of Acid Precipitation in the Catskill and Adirondack Regions, New York An Assessment of Forest Health and Soil Nutrient Status to Determine the Effects of Logging Practices on Water Quality in New York City's West-of-Hudson Watersheds Organic Wastewater and Pesticide Monitoring at Key Points in the New York City Reservoir System Organic Wastewater Contaminants in New York City Watersheds Mercury Cycling and Bioaccumulation in the Upper Hudson River Basin--Fishing Brook Changes in Soil and Stream Water Chemistry in Response to Reduction in Acid Deposition in the Catskills Detection and Quantification of Oxygenated Polycyclic Aromatic Hydrocarbons (oxy-PAHs) in Groundwater Near the Former Manufactured Gas Plant in Bay Shore, N.Y. Mercury Deposition in the Biscuit Brook Watershed Emerging Methods for Detection and their Potential for Inventorying Brook Trout Populations in Streams of the Western Adirondacks Status of benthic macroinvertebrate communities and toxicity of sediments in the Niagara River Area of Concern, New York Status of benthic macroinvertebrate communities and toxicity of sediments in the Eighteenmile Creek Area of Concern, New York Effects of acid rain on the ecological health of Long Island’s forests and ponds Urban Waters Initiative – BRONX & HARLEM RIVERS Detection and Quantification of Oxygenated Polycyclic Aromatic Hydrocarbons (oxy-PAHs) in Groundwater Near the Former Manufactured Gas Plant in Bay Shore, N.Y. Balancing Wetland Functions in an Urban Setting -- Water-Quality Improvement and Habitat Preservation, Ellison Park Wetland, Monroe County, New York Mercury Deposition in the Biscuit Brook Watershed Urban Waters Initiative – BRONX & HARLEM RIVERS Status of benthic macroinvertebrate communities and toxicity of sediments in the Eighteenmile Creek Area of Concern, New York Mercury concentration in water, sediment, and fish in the Neversink watershed, New York An Assessment of Forest Health and Soil Nutrient Status to Determine the Effects of Logging Practices on Water Quality in New York City's West-of-Hudson Watersheds Status of benthic macroinvertebrate communities and toxicity of sediments in the Niagara River Area of Concern, New York Effects of acid rain on the ecological health of Long Island’s forests and ponds Emerging Methods for Detection and their Potential for Inventorying Brook Trout Populations in Streams of the Western Adirondacks Water Quality of the Upper Delaware Scenic and Recreational River and Tributary Streams, New York and Pennsylvania Assessing American Eel Populations in Tributaries to the Upper Delaware River Assessment of Regional Forest Health and Stream and Soil Chemistry Using a Mulit-Scale Approach and New Methods of Remote Sensing Interpretation in the Catskill Mountains of New York Changes in Soil and Stream Water Chemistry in Response to Reduction in Acid Deposition in the Catskills Geomorphology, Biology, & Stability of Catskill Mountain Streams, New York Organic Wastewater and Pesticide Monitoring at Key Points in the New York City Reservoir System Organic Wastewater Contaminants in New York City Watersheds An Integrated Assessment of the Recovery of Surface Waters from Reduced Levels of Acid Precipitation in the Catskill and Adirondack Regions, New York Estrogenicity in Streams of New York State Mercury Cycling and Bioaccumulation in the Upper Hudson River Basin--Fishing Brook