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These data sets are is a compilation of bird and environmental samples obtained from 6 sites in Maricopa County, Arizona on the dates shown. Sites were only visited and sampled if they had Rosy-cheeked lovebirds coming to bird feeders at the location and with the permission of the property owner. Two swab samples were obtained from each captured bird and 3 swab samples were collected from the environment at each site. Each sample was tested by PCR for Chlamydia psittaci, Psittacine Circovirus genotype 1 [PCV-1]), and Psittacine Circovirus genotype 2 (PCV-2) and, for appropriate samples (love birds and environmental samples) and where enough sample material remained for PBFD virus Pathotype 2.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Arizona,
Chlamydia psittaci,
Maricopa,
Mesa,
Phoenix,
Fibropapillomatosis (FP) is a tumor disease of marine turtles associated with Chelonid herpesvirus 5 (ChHV5) that has historically been refractory to growth in tissue culture. Here, we show for the first time de novo formation of ChHV5-positive intranuclear inclusions in cultured green turtle cells, which is indicative for active lytic replication of the virus. The minimal requirements to achieve lytic replication in cultured cells included 1) either in-vitro culturing of ChHV5-positive tumor biopsies or organotypic cultures consisting of ChHV5-positive turtle fibroblasts in collagen rafts seeded with ChHV5-negative or -positive turtle keratinocytes and 2) keratinocyte maturation, which occurred naturally in explanted...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Hawaii,
Herpesvirus,
USGS Science Data Catalog (SDC),
electron microscopy,
immunohistochemistry,
The data set contains results for nine serum biochemistries in molting Pacific black brant (Branta bernicla nigricans). These data were used to calculate reference intervals (sometimes referred to as normal values) for the nine serum biochemistries. All brant were after-hatch year. All samples were collected in 2006 and 2007 in the Teshekpuk Lake Special Area, Alaska.
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alaska,
Arctic Coastal Plain,
Serum biochemistry,
Teshekpuk Lake Special Area,
USGS Science Data Catalog (SDC)
The GIS shapefile Extra limit counts of southern sea otters 2019 is a point layer representing the locations of sea otter sightings that fall outside the officially recognized range of the southern sea otter (Enhydra lutris nereis) in mainland California. These data were collected during the spring 2019 range-wide census. The USGS range-wide sea otter census has been undertaken each year since 1982, using consistent methodology involving both ground-based and aerial-based counts. The spring census provides the primary basis for gauging population trends by State and Federal management agencies. Sea otter distribution in California (the mainland range) is considered to comprise a band of potential habitat stretching...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: California,
Central California Coastal,
Southern California Coastal,
aerial counts,
biogeography,
To understand the genetic structure of six rare plant species (Acanthomintha ilicifolia, Baccharis vanessae, Chloropyron maritimum ssp. maritimus, Deinandra conjugens, Dicranostegia orcuttiana, Monardella viminea), we obtained samples from known occurrences in San Diego County, prepared and sequenced ddRAD genomic libraries, and developed and analyzed a panel of genetic markers to assess population diversity and divergence. We provide this SNP genotype dataset in Structure format, produced in Stacks v2.0b8, for future monitoring efforts and population genetic analysis. These data support the following publication: Milano, E.R., and Vandergast, A.G., 2018, Population genomic surveys for six rare plant species in...
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria are met. This dataset contains results from a study examining the potential impacts of projected climatic change on prescribed burning in the southeastern United States. A set of burn window criteria (suitable weather conditions within which burning may occur based on maximum daily temperature, daily average relative humidity, and daily average wind speed), were applied to projections from an ensemble of Global Climate Models (GCM) under two greenhouse gas emission scenarios, as well as past observations for comparison. Data are...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Alabama,
Arkansas,
Florida,
Georgia,
Kentucky,
Data are included for field surveys conducted for freshwater mussels within the Pine Creek watershed in the Mid-Atlantic region of the United States. Timed search (qualitative) surveys were conducted in ~200 meter sections of river between 1995 and 2009; The number of mussels of each species and associated search time were recorded for each survey section to determine a catch per unit effort (CPUE; number of individuals found per person hour).
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
USGS Science Data Catalog (SDC)
Lidar-derived digital elevation models often contain a vertical bias due to vegetation. In areas with tidal influence the amount of bias can be ecologically significant, for example, by decreasing the expected inundation frequency. We generated a corrected digital elevation mode (DEM) for Suisun marsh using a modification of the Lidar Elevation Adjustment with NDVI (LEAN) technique (Buffington et al. 2016). GPS survey data (6912 points, collected across public and private land in 2018), Normalized Difference Vegetation Index (NDVI) derived from an airborne multispectral image (June 2018), a 1 m lidar DEM from September 2018, and a 1 m canopy surface model were used to generate models of predicted bias across the...
Observations (reduced to detected/not detected) of 45 vertebrate species (seven mammals, seven amphibians, and 31 reptiles) across Southern California pitfall sampling projects conducted between 1995 through 2015. Habitat patch locations of every pitfall sampling project presented in a shapefile. Habitat patches were measured based on the size when pitfall sampling began within each. Sampling projects within the same geographic area may have different sized patches based on date of project sampling and if patch erosion occurred. A matrix of whether each species was expected within each habitat patch's species pool based on range maps and published records is also included. These data support the following publication:...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Los Angeles County,
Orange County,
Riverside County,
San Bernardino County,
San Diego County,
This dataset contains data pertaining to ground surface cover in 30 meter plots around a random selection of points within chaparral from Santa Barbara county south to San Diego County in southern California, USA. These data were obtained from historical aerial imagery from 1943 to 1959 and current imagery from 2016 to 2018 and they were compared to quantify changes in cover type over time. These data support the following publication: Syphard, A.D., Brennan, T.J., Rustigian‐Romsos, H. and Keeley, J.E., 2022. Fire‐driven vegetation type conversion in southern California. Ecological Applications, p.e2626. https://doi.org/10.1002/eap.2626.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Botany,
Forestry,
Land Use Change,
Remote Sensing,
Southern California,
To describe calling activity of Pseudacris crucifer in relation to temperature, precipitation, and wetland water levels, we programmed an acoustic recorder (Wildlife Acoustics) to sample seasonal amphibian calls remotely at study site SC4DAI2 in the St. Croix National Scenic Riverway from 2008 to 2012. We programmed the recorder to sample for five minutes at the top of every hour of every day from late winter/early spring through late summer. We used the Songscape option in Songscope software to generate annual summaries of all of our acoustic samples from SC4DAI2. These summaries included a median dB level for each prescribed frequency within each recording. Pseudacris crucifer, the spring peeper, inhabited SC4DAI2...
The shapefiles depict the valley bottom areas over which HEC-RAS model results were summarized. Valley bottoms were manually delineated in ArcMap by visually interpreting LIDAR terrain models and aerial imagery. Substantial changes in elevation, curvature, and slope were interpreted within the context of their position within the study reach to be channel banks and valley walls. Such areas were excluded from the valley bottom delineation.
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