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Data used to test a video monitoring and computational system for estimating juvenile fish abundance
We developed and tested neural network-based models to recognize and count emigrating juvenile river herring in continuous video. Continuous video was collected from an underwater camera installed at Great Herring Pond in Bourne, Massachusetts (USA) between June and November 2017. Our algorithm extracts video frames to assess presence/absence of fish and count numbers of fish emigrating. We used extracted video frames to assess model performance. Provided datasets include information about extracted frames that were used for model assessment. This data release includes four datasets that were used to test model performance and select the best fitting model. (1) The “Model Evaluation Dataset” includes count and presence/absence...
Categories: Data;
Tags: Ecology,
New England, Massachusetts, Cape Cod,
USGS Science Data Catalog (SDC),
biota
Note: This data release has been superseded, available here: https://doi.org/10.5066/P9MYL7WJ This data release contains processed high-resolution multichannel sparker seismic-reflection (MCS) data that were collected aboard Humboldt State University’s R/V Coral Sea in October of 2018 on U.S. Geological Survey cruise 2018-658-FA on the shelf and slope between Cape Blanco, Oregon, and Cape Mendocino, California. MCS data were collected to characterize quaternary deformation and sediment dynamics along the southern Cascadia margin.
Geochemical analyses of authigenic carbonates, bivalves, and pore fluids were performed on samples collected from seep fields along the Queen Charlotte Fault, a right lateral transform boundary that separates the Pacific and North American tectonic plates. Samples were collected using grab samplers and piston cores, and were collected during three different research cruises in 2011, 2015, and 2017.
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Haida Gwaii,
PCMSC,
Pacific Coastal and Marine Science Center,
The U.S. Geological Survey (USGS) developed a systematic, quantitative approach to prioritize candidate basins that can support the assessment and forecasting objectives of the major USGS water science programs. Candidate basins were the level-4 hydrologic units (HUC4) with some of the smaller HUC4s being combined (hereafter referred to as modified HUC4 basins). Candidate basins for the contiguous United States (CONUS) were grouped into 18 hydrologic regions. Thirty-three geospatial variables representing land use, climate change, water use, water-balance components, streamflow alteration, fire risk, and ecosystem sensitivity were initially considered to assist in ranking candidate basins for study. The two highest...
Categories: Data;
Tags: Climatology,
Ecology,
Hydrology,
Integrated Water Science Basins,
Land Use Change,
This dataset contains absolute-gravity data collected by the USGS Southwest Gravity Program, a collaborative effort of the Arizona, California, and New Mexico Water Science Centers to monitor and model groundwater-storage change. Data were collected following the methods in "Procedures for Field Data Collection, Processing, Quality Assurance and Quality Control, and Archiving of Relative and Absolute-Gravity Surveys", U.S. Geological Survey Techniques and Methods book 2, chapter D4 . All data are reviewed and approved. Additional gravity data, including network-adjusted relative- and absolute-gravity data, may be available in ScienceBase Data Releases.Gravity data are provided as two files:sgp_agdb_stations_YYYY-MM-DD.csv...
This data set contains shoreline rate of change statistics for New York State coastal wetlands. Analysis was performed using the Digital Shoreline Analysis System (DSAS), created by U.S. Geological Survey, version 5.0, an extension for ArcMap. A reference baseline was used as the originating point for orthogonal transects cast by the DSAS software. The transects intersect each polyline vector shoreline establishing intersection measurement points, which were then used to calculate the rates of change. End-point rates, calculated by dividing the distance of shoreline movement by the time elapsed between the oldest and the most recent shoreline, were generated for wetlands where fewer than three historic shorelines...
Categories: Data;
Types: ArcGIS REST Map Service,
ArcGIS Service Definition,
Downloadable,
Map Service;
Tags: Digital Shoreline Analysis System,
End-Point Rate,
Geography,
Geomorphology,
Great South Bay,
Groundwater quality data were collected in 5,000 wells between 1988-2001 by the National Water-Quality Assessment Project. About 1,500 of these wells were sampled again between 2002-2012 to evaluate decadal changes in groundwater quality. Monitoring wells, domestic supply wells, and some public supply wells were included in this study. All water was collected prior to treatment. Groundwater samples used to evaluate decadal change were collected from networks of wells with similar characteristics. Some networks, consisting of domestic or public supply wells, were used to assess changes in the quality of groundwater used for drinking water supply. Other networks, consisting of monitoring wells, assessed changes in...
Inland fishes provide important ecosystem services to communities worldwide and are especially vulnerable to the impacts of climate change. Fish respond to climate change in diverse and nuanced ways which creates challenges for practitioners of fish conservation, climate change adaptation, and management. Although climate change is known to affect fish globally, a comprehensive online, public database of how climate change has impacted inland fishes worldwide and adaptation or management practices that may address these impacts does not exist. We conducted an extensive, systematic primary literature review to identify peer-reviewed journal publications describing projected and documented examples of climate change...
The data release consists of two companion air and water temperature datasets collected as part of the U.S. Geological Survey (USGS) Next Generation Water Observing System (NGWOS) program with data from both the Little Lehigh and White Clay Creek Watersheds in the Delaware River Basin. Data consists of 15-minute temperature data during the 7/2021 – 12/2022 study period for 21 air and 49 water locations (which include 6 continuous monitoring USGS streamgages) in the Little Lehigh Creek watershed and 8/2021 – 1/2023 for 28 air and 36 surface water locations (including 6 continuous monitoring USGS streamgages) in the White Clay Creek watershed. Datalogger installation locations for surface water locations were targeted...
Categories: Data;
Tags: Air Temperature,
Continuous Data,
Delaware River Basin,
Hydrology,
Pennsylvania,
This data release contains coastal wetland synthesis products for the state of Connecticut. Metrics for resiliency, including the unvegetated to vegetated ratio (UVVR), marsh elevation, tidal range, wave power, and exposure potential to environmental health stressors are calculated for smaller units delineated from a digital elevation model, providing the spatial variability of physical factors that influence wetland health. The U.S. Geological Survey has been expanding national assessment of coastal change hazards and forecast products to coastal wetlands with the intent of providing federal, state, and local managers with tools to estimate the vulnerability and ecosystem service potential of these wetlands. For...
A total of 27 temperature sensors were deployed along the lower 90 miles of the Yakima River at 7 locations where cold water had been previously observed. These 7 cold-water areas had 3 to 6 temperature sensors installed to document the extent and duration of these cold-water areas and their impacts on mainstem temperatures of the Lower Yakima River. Cold-water areas included the mouths of tributaries, alongside channels, and within alcoves. Sensor deployments ranged from 1 to 2 years beginning in October 2018. All temperature data are included in the Yakima.temperatures.zip folder. Details of each monitoring location are provided in the site.locs.csv file. In addition to the raw data and site location information,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Benton County,
Ecology,
Hydrology,
Richland, WA,
This dataset is intended to provide seamless, integrated geologic mapping of the U.S. Intermountain West region as a contribution to The National Geologic Map supported by the National Cooperative Geologic Mapping Program of the U.S. Geological Survey. Surficial and bedrock geology are included in this data release as independent datasets at a variable resolution from 1:50,000 to 1:250,000 scale. No original interpretations are presented in this dataset; rather, all interpretive data are assimilated from referenceable publications. Derivative polygon features created for this dataset demonstrate the distribution of SIGMa-GeMS Geologic Provinces derived from the distribution of map units. Initial contributions to...
Effective monitoring and prediction of flood and drought events requires an improved understanding of how and why surface-water expansion and contraction in response to climate varies across space. This paper sought to (1) quantify how interannual patterns of surface-water expansion and contraction vary spatially across the Prairie Pothole Region (PPR) and adjacent Northern Prairie (NP) in the United States, and (2) explore how landscape characteristics influence the relationship between climate inputs and surface-water dynamics. Due to differences in glacial history, the PPR and NP show distinct patterns in regards to drainage development and wetland density, together providing a diversity of conditions to examine...
American pikas (Ochotona princeps) are small lagomorphs that live in mountainous talus areas of western North America. Studies on the histopathology of American pikas are limited. This report summarizes the clinical histories, and gross and histologic findings of 12 American pikas, including nine captive and three wild animals. Death was often attributed to stress (transport, handling, and anesthesia) with few to no premonitory clinical signs. Two cases died due to infection: one had bacterial pyogranulomatous dermatitis, cellulitis, and lymphadenitis with sepsis; the other case had fungal necrotizing colitis. Incidental parasite infections included sarcocystosis, nematodiasis (oxyurids), and ectoparasitism. Most...
Categories: Data;
Tags: American pika,
Colorado,
USGS Science Data Catalog (SDC),
Wildlife Biology,
Wildlife Disease,
These data were compiled for monitoring riparian vegetation change along the Colorado River. This file contains data recorded at 42 sandbars between Lees Ferry and Diamond Creek, AZ, which are sampled for both geomorphic and vegetation change annually. Field data contained here were collected from 2012 to 2016 in September and October of each year. Plant species cover values in 5441 1m^2 quadrat frames, locations and elevations of those sampling frames, slope and aspect, sample dates, temperature and precipitation data, and flood frequency parameters were either recorded in the field or calculated. Annual and seasonal climate variables were estimated from eight weather stations distributed along the river corridor...
The dataset consists of geochemical and isotopic data from fine-grained sediments and glendonite crystals collected at Carter Creek on the North Slope of Alaska. Total Organic Carbon (TOC) values in the measured section were found to range between 0.5 and 3.5%, with a shift towards lower values in the uppermost 5 m of the section. Stable isotopes (13C) in organic matter were relatively stable throughout the section, ranging between -25.5 and -26, with a slight 0.3 per mil positive shift within this range approximately 57 m from the base of the section. Glendonites themselves were analyzed for δ13Ccarb and δ18Ocarb, with δ18O values relatively consistent between -0.22 and +1.28, and a much wider range of δ13C values...
This dataset was created to support the Washington D.C. StreamStats project funded by the Washington D.C. Department of Energy and Environment (DOEE). The dataset contains digital elevation model (DEM), flow direction and catchment layers that were conditioned using Washingtons D.C.’s stormwater network layer. The data are hosted online as a component of the USGS StreamStats web application (https://streamstats.usgs.gov), where users can interact with a map of Washington D.C.’s stormwater pipe system and National Hydrography Dataset (NHD) “best resolution” blue lines to delineate drainage basins that account for pipe flow. This project utilized 1-meter (high resolution) terrain products, which improves upon existing...
This data release contains groundwater level trend results from 110 U.S. Geological Survey (USGS) observation wells in and near the Delaware River Basin. Mean annual groundwater level elevations from water years 2000-2020 were computed from mean daily recorded groundwater levels and discretely measured groundwater levels. Both time series were analyzed using the Mann-Kendall test for monotonic trend and the Thiel-Sen slope. Wells are completed in both confined and unconfined aquifers. Data include well identification number, latitude, longitude, aquifer type, trend slopes and p-values for both mean annual time series at 110 wells.
Categories: Data;
Tags: Delaware River Basin,
Delaware River Basin,
Groundwater,
USGS Science Data Catalog (SDC),
Water Resources,
A Solinist water logger was used to collect water data at the Crawford Tract section of the Cache River Watershed in Illinois from June 22nd to November 29th of 2021. This data included temperature, pressure, and depth.
This dataset consists of daily streamflow percentiles for 1981-10-01 to 2020-03-31 relevant to streamflow drought defined using two approaches: Percentiles accounting for flow seasonality (variable threshold percentiles) and those based on the full record of data for each site regardless of season (fixed threshold percentiles). Because of the size of this dataset (99,530,836 rows), it could not be provided as a .csv file, and is instead provided as a .parquet file. Instructions on reading this file using the R programming language are provided in the Processing Step section of this metadata. The daily streamflow percentiles were estimated for ungaged areas of the Colorado River Basin (CRB) using neural network models,...
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