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This dataset consists of measurements of the digestive gland in the freshwater snail Lymnaea stagnalis orally exposed to uranium. The objective of the study was to assess the morphological effects of uranium on the snail digestive gland by light microscopy. Laboratory-cultured L stagnalis were exposed to either synthetic or natural solid phases of uranium and a subset (6 controls and 6 exposed) were euthanized and fixed in 10% neutral buffered formalin for histopathological assessment. Slides were processed and stained with hematoxalin and eosin as per standard procedure (Luna 1968). The size of each sample, the length and width of digestive gland tubules (5 random glands per sample) and height of digestive cells...
Categories: Data;
Tags: Environmental Health,
Lymnaea stagnalis,
Madison, Wisconsin,
USGS Science Data Catalog (SDC),
Wildlife Biology,
The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide...
Five principal components are used to represent the climate variation in an original set of 12 composite climate variables reflecting complex precipitation and temperature gradients. The dataset provides coverage for future climate (defined as the 2040-2070 normal period) under the RCP4.5 emission scenarios. Climate variables were chosen based on their known influence on local adaptation in plants, and include: mean annual temperature, summer maximum temperature, winter minimum temperature, annual temperature range, temperature seasonality (coefficient of variation in monthly average temperatures), mean annual precipitation, winter precipitation, summer precipitation, proportion of summer precipitation, precipitation...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
California,
Colorado,
Colorado Plateau,
Great Basin,
This Benthic Invertebrate Community Analysis dataset, a conceptual subgroup of the Lake Erie Ecological Investigations (LEEI) dataset, focuses on the benthic invertebrates sampled at Areas of Concern (AOCs) on Lake Erie. Per the Quality Assurance Project Plan (QAPP), the invertebrate samples were taken from sediments remaining from the sediment analysis. Identification of the invertebrates was completed by the same invertebrate taxonomist for both the 1998-2000 evaluation and 1986-87 historical evaluation (Smith et al. 1994) for increased consistency. Oligochaetes were identified to species if possible, chironomids were identified to genus, as adult specimens are needed for specific identification, and other taxa...
Five principal components are used to represent the climate variation in an original set of 12 composite climate variables reflecting complex precipitation and temperature gradients. The dataset provides coverage for future climate (defined as the 2040-2070 normal period) under the RCP8.5 emission scenarios. Climate variables were chosen based on their known influence on local adaptation in plants, and include: mean annual temperature, summer maximum temperature, winter minimum temperature, annual temperature range, temperature seasonality (coefficient of variation in monthly average temperatures), mean annual precipitation, winter precipitation, summer precipitation, proportion of summer precipitation, precipitation...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
California,
Colorado,
Colorado Plateau,
Great Basin,
All gillnet data represented here expand upon vessel operations (OP table) data, all of which are collected by the United States Geological Survey, Great Lakes Science Center and its partners. The Gillnet Tables contain data collected from the research vessel deploying various gear used for gillnet data collection. The database uses sample_type to indicate the gear deployed. The tables relating to Gillnet are: GN_Annulus.csv, GN_Catch.csv, GN_Effort.csv, GN_Fish.csv, GN_L, GN_LF.csv, GN_OP.csv, GN_Prey.csv, GN_Stomach.csv, LMMB_Fish_Prey.csv, and LMMB_Invert_Prey.csv Data Quality: Note that the following data release is a snapshot of the database at the time of release. Some data quality checks are still being...
Zebra and quagga mussel veligers were exposed to eleven distinct cultures (isolates) of cyanobacteria representing Anabaena, Aphanizomenon, Dolichospermum, Microcystis, and Planktothrix species and the cyanotoxin microcystin to determine the lethality of cyanobacteria on dreissenid veligers. Six-day laboratory bioassays were performed in microplates using dreissenid veligers collected from the Detroit River, Michigan, USA. Veligers were exposed to increasing concentrations of cyanobacteria and microcystin using the green algae Chlorella minutissima as a control. Raw data were fit to dose response curves formulated from a Probit model to calculate LC50 values. This data release presents the raw data summarized and...
This data release links benthic macroinvertebrate sites to both the NHDPlus Version 2 and NHDPlus High Resolution Region 02 networks, hereafter referred to as V2 and HR, using the hydrolink methodology. Linked benthic macroinvertebrate sites are those included in the Chesapeake Bay Basin-wide Index of Biotic Integrity (Chessie BIBI) developed by the Interstate Commission on the Potomac River Basin (ICPRB) and available from the Chesapeake Bay Program (https://datahub.chesapeakebay.net/LivingResources). The data set contains a unique sample identifier created by ICPRB, survey program, coordinates of sample, linked V2 COMID and HR Permanent Identifier, and information regarding uncertainty in the attribution. We strongly...
Categories: Data;
Tags: Aquatic Biology,
District of Columbia (national district),
Ecology,
Hydrology,
Maryland (state),
To address the data and information gap for characterizing coastal drought, a coastal salinity index (CSI) was developed using salinity data (Conrads 2016; Conrads and Darby, 2017). The CSI uses an approach similar to the Standardized Precipitation Index (SPI), a readily available drought index that is widely used for monitoring meteorological droughts (McKee and others, 1993). The CSI substitutes total monthly precipitation with monthly mean salinity data to determine the probability of recording a given salinity value in a particular month. The initial investigation demonstrated that the index could be used to delineate short- and long-term drought (saline) and wet (high freshwater inflow) conditions; however,...
Categories: Data;
Tags: Everglades National Park,
USGS Science Data Catalog (SDC),
brackish,
ecology,
estuary,
These data were compiled for a study that investigated the effects of drought seasonality and plant community composition in a dryland ecosystem. In 2015 U.S. Geological Survey ecologists recorded vegetation and soil moisture data in 36 experimental plots which manipulated precipitation in two plant community types. The experiment consisted of three precipitation treatments: control (ambient precipitation), cool-season drought (-66% ambient precipitation November-April), and warm-season drought (-66% ambient precipitation May-October), applied in two plant communities (perennial grasses with or without a large shrub, Ephedra viridis) over a three-year period. These data were collected from 2015 to 2022 near Canyonlands...
Categories: Data;
Tags: Achnatherum hymenoides,
Botany,
C3 photosynthesis,
C4 photosynthesis,
Canyonlands National Park,
This data release is currently being revised and is temporarily unavailable. Please contact rhkent@usgs.gov with any immediate requests. The U.S. Geological Survey Groundwater Ambient Monitoring and Assessment-Priority Basin Project (USGS GAMA-PBP) collected samples to be analyzed for per-and polyfluoroalkyl substances (PFAS) from domestic and public supply wells from May 2019 to September 2020. The datasets presented here include identification of the 28 PFAS constituents monitored by the project, Identification and brief characterization of the 211 GAMA-PBP wells for which samples were analyzed for PFAS during the study period, and analytical results for those groundwater samples, along with results for quality...
Categories: Data;
Tags: California,
Colusa County,
Environmental Health,
Geochemistry,
Humboldt County,
Three regression models were developed for describing variability of host-specific flux data in eight Great Lakes tributaries. Models include one for Lachnospiraceae flux, one for human bacteroides flux, and one for ruminant bacteroides flux. Models were developed using the R project for statistical computing with core functionality and the survival, smwrBase, and smwrQW packages. Predictor variables for these models are included in the data file and input files provided. These include sampling dates and times, rainfall depth, percent of watershed underlain by tile drainage, cattle population (for the ruminant marker model) and human population (for the human marker models). Sample collection and laboratory analyses...
Categories: Data;
Tags: Bacteria,
Great Lakes Region,
Regression analysis,
Surface water quality,
USGS Science Data Catalog (SDC)
At recent technical conferences, many coal geoscientists in academia and government institutions as well as in industry organizations have expressed concern about the dwindling number of students and young staff members interested in careers in coal geoscience. To better understand what is driving these trends and to identify potential ways that the community can increase interest and participation in coal geoscience, two different surveys were sent to 94 coal geoscientists who were current or past members of The Society of Organic Petrology (TSOP) in February 2020. As the trends and perceptions in industry and government organizations may be different than in universities, one distinct survey was sent to members...
This dataset utilized available water-quality data from the Mississippi Department of Environmental Quality and streamflow from the U.S. Geological Survey to estimate total nitrogen and total phosphorus loads and changes in loads from water years 2008 through 2018. Nutrient loads and changes in loads were estimated at 22 state ambient water-quality network sites, and were estimated using LOADEST regression models, Beale-Ratio Estimator, or WRTDS (Weighted Regression on Time, Discharge, and Season). The method selected is based on the evaluation of the flux-bias statistic and use of multiple graphical tools through EGRET to identify and characterize issues with particular models for each given dataset and is included...
Categories: Data;
Tags: Mississippi,
USGS Science Data Catalog (SDC),
United States,
Water Quality,
annual loads,
This data release contains the boundaries of assessment units, assessment input data and resulting fact sheet data tables for the assessment of undiscovered oil and gas resources in the Mesozoic petroleum systems of the Central European Basin System. The Assessment Unit is the fundamental unit used in the National and Global Oil and Gas Assessment Project for the assessment of undiscovered oil and gas resources. The Assessment Unit is defined within the context of the higher-level Total Petroleum System. The Assessment Unit is shown herein as a geographic boundary interpreted, defined, and mapped by the geologist responsible for the province and incorporates a set of known or postulated oil and (or) gas accumulations...
This data release provides the georeferenced boundaries that delimit each spatial unit of the Great Lakes Regional Aquatic Gap Analysis Project (GLGap) Coastal Hydrospatial Framework at each spatial scale from the local 90m cell to the entire Laurentian Great Lakes system and from the shoreline to the deepest offshore waters. The U.S. Geological Survey and the U.S. Fish and Wildlife Service collaborated to design a universal framework of spatial areas that encompass all space of the Laurentian Great Lakes proper. Agglomeration of the finest units (90m cells) form coarser, broader scale units. Finer units are nested within the coarser units at six spatial scales, labeled as Local Cells, Aquatic Habitat Areas, Coastal...
We investigated fine-scale genetic patterns of the federally threatened Eastern Massasauga Rattlesnake (Sistrurus catenatus) on a relatively undisturbed island in northern Michigan, USA. This species often persists in habitat islands throughout much of its distribution due to extensive habitat loss and distance-limited dispersal. These data are from 102 individual Eastern Massasauga Rattlesnakes sampled at Bois Blanc Island, Michigan and genotyped at 15 microsatellite loci. Samples were collected as part of a study to examine functional connectivity for the Eastern Massasauga. We found that the entire island population exhibited weak genetic structuring with spatially segregated variation in effective migration...
Inland fishes provide important ecosystem services to communities worldwide and are especially vulnerable to the impacts of climate change. Fish respond to climate change in diverse and nuanced ways which creates challenges for practitioners of fish conservation, climate change adaptation, and management. Although climate change is known to affect fish globally, a comprehensive online, public database of how climate change has impacted inland fishes worldwide and adaptation or management practices that may address these impacts does not exist. We conducted an extensive, systematic primary literature review to identify peer-reviewed journal publications describing projected and documented examples of climate change...
Periphyton is a complex community of detritus, bacteria, fungi, and algae that grows attached to submerged substrates. Assemblage structure data for algae and cyanobacteria from periphyton samples were collected on a monthly basis from 2017 to 2021. Compiled data were reported as absolute abundance (cells) and biovolume per volume as well as absolute abundance (cells) and biovolume per area at four locations increasing in distance East of the L-67 canal in Water Conservation Area 3 (WCA 3) of the Florida Everglades immediately north of Everglades National Park. The periphyton assemblages were analyzed for five sample types including periphyton plates (Plates), invertebrate inclusion and exclusion plates (Inverts),...
Categories: Data;
Tags: Aquatic Biology,
Ecology,
Everglades National Park,
USGS Science Data Catalog (SDC),
Water Quality,
SPARROW model dataset for total suspended solids in North Carolina, including simulated stream loads
To better understand the influence of human activities and natural processes on surface-water quality, the U.S. Geological Survey (USGS) developed the SPARROW (SPAtially Referenced Regressions On Watershed attributes) (Schwarz and others, 2006; Alexander and others, 2008) model. The framework is used to relate water-quality monitoring data to sources and watershed characteristics that affect the fate and transport of constituents to receiving surface-water bodies. The core of the model consists of using a nonlinear-regression equation to describe the non-conservative transport of contaminants from point and nonpoint sources on land to rivers, lakes and estuaries through the stream and river network. In North Carolina,...
Categories: Data;
Tags: North Carolina (state),
USGS Science Data Catalog (SDC),
Water Quality,
surface water quality
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