Filters: Tags: {"scheme":"USGS Thesaurus"} (X) > Types: OGC WMS Service (X) > partyWithName: Western Ecological Research Center (X)
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These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: California,
Ecology,
Marin County,
Point Reyes National Seashore,
USGS Science Data Catalog (SDC),
To understand the genetic structure of six rare plant species (Acanthomintha ilicifolia, Baccharis vanessae, Chloropyron maritimum ssp. maritimus, Deinandra conjugens, Dicranostegia orcuttiana, Monardella viminea), we obtained samples from known occurrences in San Diego County, prepared and sequenced ddRAD genomic libraries, and developed and analyzed a panel of genetic markers to assess population diversity and divergence. We provide this SNP genotype dataset in Structure format, produced in Stacks v2.0b8, for future monitoring efforts and population genetic analysis. These data support the following publication: Milano, E.R., and Vandergast, A.G., 2018, Population genomic surveys for six rare plant species in...
This release consists of data collected from 26 plots in two national parks over a 19-year period. The data consists of plot-level seed counts for three genera, number of seed traps, live tree basal area, plot area, and climate metrics from the gridmet gridded data set, the daymet gridded data set, the PRISM gridded data set, and two nearby COOP stations.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Holocene,
Sequoia-Kings National Park,
Terrestrial surface,
USGS Science Data Catalog (SDC),
Hourly wave-height observations at 32 sites throughout the Channel Islands National Park and San Nicolas Island, site-specific hind casts from the Coastal Data Information Program (CDIP), and contemporary wave height, period, and direction from regional buoys taken during intervals between 2013 and 2017.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Channel Islands,
Pacific,
USGS Science Data Catalog (SDC),
ocean waves,
The U.S. Geological Survey, Western Ecological Research Center (USGS-WERC), with support from the Bureau of Ocean Energy Management (BOEM), is working with many partners to generate an Atlas of Breeding Seabirds of the Main Hawaiian Islands. This atlas will provide benchmarks to measure future changes in seabird population sizes and breeding distribution throughout Hawai‘i and will also assist efforts to evaluate threats to Hawaiian seabirds both on land and at sea. Ultimately, species- and colony-specific data for main Hawaiian Island seabirds on land and at sea will inform evaluations of potential risk and options for mitigation strategies for effects of offshore energy infrastructure on seabirds. This ScienceBase...
Eggshell thickness was measured at the egg equator and poles (sharp pole and blunt pole) for 12 avian species. Eggshell thickness was related to egg morphometrics (egg length and width), embryonic development, egg status, and mercury contamination. Individual eggshells each have up to 3 thickness measurements, linked by the eggshell identification. Each measurement has the corresponding egg length, egg width, egg status, mercury concentration, and nest identification. Additionally, eggshell thickness was measured at 5 equally spaced positions along the longitude of the egg (sharp pole, quarter egg, half egg, three quarter egg, and blunt pole) in a subset of Forster's tern (Sterna forsteri) eggs. These data support...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Nevada,
USGS Science Data Catalog (SDC),
Washington,
biota,
These data represent occupancy surveys conducted in long-term monitoring sites in Yosemite National Park in 2018 for three anurans, the Yosemite Toad (Anaxyrus canorus), the Sierran Treefrog (Pseudacris sierra), and the Sierra Nevada Yellow-legged Frog (Rana sierrae). The data include independent double-observer surveys and time-to-detection data to calculate detection probabilities and account for false negatives, or the failure to detect a species at a site where it occurs. These data support the following publication: Schimel, D.S., 2018, Editorial: Ecological Applications, v. 28, no. 4, p. 869–870, https://doi.org/10.1002/eap.1735.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: USGS Science Data Catalog (SDC),
USGS-EMA-LOW-SB SMC: Amphibians/ARMI,
Wildlife Biology,
Yosemite National Park,
amphibians,
Predation and habitat degradation by non-native species are principal terrestrial threats to the federally endangered Hawaiian Petrel (ʻuaʻu, Pterodroma sandwichensis) and Hawaiian Goose (nēnē, Branta sandvicensis) within Haleakalā National Park (HALE), Maui, Hawaiʻi. Since 1981, HALE has maintained a network of live-traps to control invasive mammalian predators and protect these endangered birds. To continue evaluations of trapping efficiency in HALE, we analyzed 2000 - 2014 trap events. Trap events were divided up into six event types classified into three event categories: no event, other event [bait lost, or trap triggered], or predator event [rat, cat, or mongoose caught]. Event type analysis was divided up...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Hawaii,
Maui,
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
California’s Coastal Data Information Program (CDIP) has a hind cast feature that allows one to model hourly height and period at known locations back to 2000. Fitting these hindcasts to observed height and periods indicates that the hindcasts have consistent biases that can be corrected for statistically. Past work generated bias corrections for 32 sites in the Channel Islands. We use these bias corrections to correct hourly height and period hindcasts at these sites from 2000 to 2017. Data columns include: year_utc, month_utc, day_utc, hour_utc, cdip_Hs_m, cdip_Tp_sec, cdip_Dp_degTrue, adjusted_cdip_Hs_m, mean_sensor_pressure_dbar, Transect_depth_m, ubr_Sensor, Tbr_sensor, wave_energy, date, juliand, season, wyr,...
These data include site- and survey-specific information for occupancy surveys of Dixie Valley Toads (Anaxyrus williamsi) collected in the Dixie Valley, Churchill County, Nevada, in May 2019. The data include both multiple surveys of the same sites and time-to-detection information to quantify detection probabilities and account for imperfect detection in assessments of Dixie Valley Toad occupancy. These data support the following publication: Schimel, D.S., 2018, Editorial: Ecological Applications, v. 28, no. 4, p. 869–870, https://doi.org/10.1002/eap.1735.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Churchill County,
Dixie Valley,
Nevada,
USGS Science Data Catalog (SDC),
USGS-EMA-LOW-SB SMC: Amphibians/ARMI,
This U.S. Geological Survey data release consists of 3 raster datasets representing estimates of probability of ignition (ProbIgnitPredict.tif), fire frequency (FrequencyPredictRF.tif), and burn severity (dNBRPredictRF.tif) in the Mojave Desert from 1984 to 2010. The data include: (1) A shapefile of the Mojave Desert that was used as our study area boundary (MojaveEcoregion_TNS_UTM83.shp). The original shapefile was obtained from NatureServe in 2009; (2) Three Tagged-Interchange Format (TIF) raster datasets representing probability of ignition, fire frequency, and burn severity. Resolution equals 30 meters, projection equals UTM Zone 11N. These data support the following publication: Klinger, R., Underwood, E.C.,...
This dataset contains genomic records from 184 California Gnatcatchers (Polioptila californica) collected at 18 sites in southern California (USA), 13 sites in Baja California (Mexico), and 17 sites in Baja California Sur (Mexico). Genomic markers were generated from ddRAD loci (Peterson and others, 2012) and analyzed using the Stacks v2.53 (Catchen and others, 2013) pipeline. The genotypes for all samples are provided in a VCF file with 84,125 independent loci and 7 percent missing data. A companion file is provided with sample names and occurrence designations. These files may be opened and edited in a text editor program, such as Notepad (PC) or BBEdit (Mac). The .vcf file can be loaded into the Stacks population...
This dataset provides summary statistics of multiple sage-grouse microhabitat characteristics of the Great Basin. These data support the following publication: Coates, P.S., Brussee, B.E., Ricca, M.A., Dudko, J.E., Prochazka, B.G., Espinosa, S.P., Casazza, M.L., and Delehanty, D.J., 2017, Greater sage-grouse (Centrocercus urophasianus) nesting and brood-rearing microhabitat in Nevada and California—Spatial variation in selection and survival patterns: U.S. Geological Survey Open-File Report 2017-1087, 79 p., https://doi.org/10.3133/ofr20171087.
These data are multi-state capture histories of 273 individual San Francisco gartersnakes collected at a site before and after a portion of the site was burned. Data collection began in 2008 and continued until 2013, and the prescribed fire was applied in the fall of 2010. These data support the following paper: Halstead, B. J., Thompson, M. E., Amarello, M. , Smith, J. J., Wylie, G. D., Routman, E. J. and Casazza, M. L. (2018), Effects of prescribed fire on San Francisco gartersnake survival and movement. Jour. Wild. Mgmt.. . doi:10.1002/jwmg.21585
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: San Mateo County, CA,
USGS Science Data Catalog (SDC),
Wildlife Biology,
capture-mark-recapture,
capturing (animals),
Arid ecosystems are often vulnerable to transformation to invasive-dominated states following fire, but data on persistence of these states are sparse. The grass/fire cycle is a feedback process between invasive annual grasses and fire frequency that often leads to the formation of alternative vegetation states dominated by the invasive grasses. However, other components of fire regimes, such as burn severity, also have the potential to produce long-term vegetation transformations. Our goal was to evaluate the influence of both fire frequency and burn severity on the transformation of woody-dominated communities to communities dominated by invasive grasses in major elevation zones of the Mojave Desert of western...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Mojave desert,
USGS Science Data Catalog (SDC),
biological invasions,
chronosequence,
community structure,
Data includes results collected in the Mohave Desert during 2016 using three survey methods (acoustic recording units, camera traps, and call-count surveys) to detect gamebirds, primarily Gambel's quail (Callipepla gambelii) but also including records of mourning dove (Zenaida macroura), Eurasian collared-dove (Streptopelia decaocto), and chukar (Alectoris chukar). ARU data includes the Selections (portions of the recording identified as potentially containing a Gambel's quail call) and Detections (quail calls confirmed following audible and visual verification of the recording and spectrogram). ARU data provided is summarized into hourly segments where selections occurred among five study sites. Camera trap data...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Mohave National Preserve,
Riverside East Solar Energy Zone (SEZ),
USGS Science Data Catalog (SDC),
Wildlife Biology,
biota,
Provided are data containing condition assessments on individual giant sequoia (Sequoiadendron giganteum; SEGI) stems and post-fire regeneration counts within Board Camp, Suwanee, New Oriole Lake, Homer’s Nose, and a subset of Redwood Mountain and Dillonwood groves of Sequoia and Kings Canyon national parks, respectively. Stem data contain condition-related attributes (e.g., spatial location, diameter breast height, status - live or dead, percent canopy that is live, scorched or torched). Regeneration plots are located using a spatially-balanced sampling design (Generalized Random Tessellation Stratified - 'GRTS'). Each regeneration plot is a fixed radius circle (11.35 meters or 17.84 meters) and contain count data...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Ecology,
Forestry,
Sequoia National Park,
USGS Science Data Catalog (SDC),
biota,
Locations of sites at which U.S. Geological Survey (USGS) biologists surveyed for Temblor legless lizards (Anniella alexanderae) in 2022 and 2023 and the results of those surveys. At the time of the species description, little was known about the distribution of the Temblor legless lizard beyond a few localities. Surveys were designed to gather information on the distribution of Temblor legless lizards to help inform a Species Status Assessment by the U.S. Fish and Wildlife Service. Binary values for each year indicate whether Temblor legless lizards were detected under cover boards at a site in that year (1) or were not detected at that site in that year (0). Non-detection of Temblor legless lizards at a site does...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Ecology,
Fresno County,
Kern County,
USGS Science Data Catalog (SDC),
We present correction coefficients for hourly wave height and period hind casts for 32 sites throughout the Channel Islands National Park and San Nicolas Island. Each site is described in terms of its location, orientation, and transect depth. To use this table, first generate a site-specific wave height and period hind cast using the California Coastal Data Information Program (CDIP) Monitoring and Prediction (MOP) System (https://cdip.ucsd.edu/documents/index/product_docs/mops/mop_intro.html).
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Channel Islands,
Pacific,
USGS Science Data Catalog (SDC),
location,
We compiled time series of egg mass counts (an index of adult female abundance) from Rana boylii populations in 36 focal streams and fit a Multiple Population Viability Analysis (MPVA) model to quantify how streamflow metrics, stream temperature, and surrounding land cover affect population growth. In addition, data on streamflow, stream temperature, and surrounding land cover for each stream were compiled from existing sources. These data support the following publication: Rose, J.P., Kupferberg, S.J., Peek, R.A., Ashton, D., Bettaso, J.B., Bobzien, S., Bourque, R.M., Breedveld, K.G., Catenazzi, A., Drennan, J.E., Gonsolin, E., Grefsrud, M., Herman, A.E., House, M.R., Kluber, M.R., Lind, A.J., Marlow, K.R., Striegle,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
California,
Ecology,
Hydrology,
USGS Science Data Catalog (SDC),
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