Filters: Tags: {"type":"USGS Scientific Topic Keyword","name":"aquatic biology"} (X) > partyWithName: U.S. Geological Survey - ScienceBase (X) > partyWithName: Water Resources (X)
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The Stream Conditions of Chester County Biological Monitoring Network was established by the U.S. Geological Survey and the Chester County Water Resources Authority in 1969. Benthic-macroinvertebrate, habitat, and stream chemistry data were collected annually from 1998-2021 at 18 fixed location sites. Additionally, nine flexible location sites were selected and sampled annually from 1998-2021. Some of the flexible location sites were sampled more than once over the study period. All data were collected in the fall months (October-November) during baseflow conditions. The benthic-macroinvertebrate data collected was used to calculate six metrics and to establish an index of biotic integrity for each sample, while...
The Alabama Department of Transportation (ALDOT) and the U.S. Geological Survey (USGS) studied several sites in the northern East Gulf Coastal Plain of Alabama to investigate effects of newly installed box culverts on the natural conditions of the streams they are traversing (Pugh and Gill, 2021). Data collection for the study spanned approximately 10 years and included before-, during-, and after-construction phases of box culvert installations at selected stream sites. The objectives of the project were to (1) assess the degree and extent of changes in geomorphic conditions, suspended-sediment concentrations, turbidity, and benthic macroinvertebrate populations at selected small streams following box culvert installation...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
East Gulf Coastal Plain,
Geomorphology,
Soil maps,
State of Alabama,
From August 2018 to October 2019, the U.S. Geological Survey collected spatially high-resolution water quality data as part of five shoreline synoptic surveys around the perimeters of Owasco, Seneca, and Skaneateles Lakes within the Finger Lakes Region of New York. Water-quality data were collected just below water surface utilizing YSI EXO2 multiparameter sondes and portable nitrate sensors paired with real-time GPS data as part of a HABs monitoring program in the Finger Lakes. In October 2019, water-quality data collection was paired with discrete phytoplankton grab samples on Owasco Lake and Seneca Lake. Phytoplankton grab samples were collected just below water surface with a peristaltic pump at twelve locations...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Contaminants, HABS,
Finger Lakes,
Limnology,
New York,
The dataset includes multiple file types (CSV, ArcGIS shapefiles, and images), data relates to the elemental analysis of fish otoliths. Otoliths examined in this study were from randomly-sampled individual Tidewater Goby (Eucyclogobius newberryi) and Prickly Sculpin (Cottus asper) from the adult population of Rodeo Lagoon and Rodeo Creek, Marin County, California. The fish were collected in April and August 2016.
This dataset includes field data for fishes sampled using gill nets during daylight hours in the Northern Sacramento-San Joaquin Delta, California, USA. This data release includes all measured environmental parameters and fish taxa included in the analysis. First posted - August 19, 2019 (available from author) Revised - December 18, 2019 (version 1.1)
Categories: Data,
Data Release - Revised;
Tags: Aquatic Biology,
Aquatic Biology,
Cache Slough Complex,
California,
Ecology,
This data set includes taxonomic data for zooplankton, larval fish, and phytoplankton sampled in Little Holland Tract and Liberty Island Conservation Bank, in the northern Sacramento-San Joaquin River Delta, California. Zooplankton and larval fish were collected with target specific trawl nets and phytoplankton was collected from water grabs. This data release includes all measured environmental parameters.
Fish tissue from 203 samples collected at five locations in the Niagara River Area of Concern in 2018 were analyzed for a wide range of analytes including Polychlorinated Biphenyls (PCBs), pesticides (E1 and E2), polycyclic aromatic hydrocarbons (PAH), organochlorine and other persistent organic compounds, metals, lipid and moisture. Over 230 analytes were analyzed in the tissue samples, including 160 PCB congeners. Fish tissues from a subset of the sites (n=40) were also analyzed for Dioxins and Furans. The data set includes a variety of laboratory quality assurance data including sample replicates, laboratory blank data, laboratory spike data, matrix spike recoveries, and replicate matrix spike recoveries.
Categories: Data;
Tags: Aquatic Biology,
Aquatic Community Health,
Contaminants, Organic,
Contamination and pollution,
Dioxins,
Macroinvertebrate samples were collected from streams tributary to Honnedaga Lake and from the Middle Branch of the Black River during 2012-2016 and analyzed for methylmercury concentrations and for stable isotope ratios of nitrogen and carbon. Macroinvertebrates were identified in the field, and the level of taxonomic resolution varied from order to species; most taxa were identified to the family level. Specimens were field-processed into composite samples, field-frozen, and submitted to the mercury laboratory for freeze-drying and analysis. Subsamples were then submitted to the stable isotope laboratory for analysis of nitrogen and carbon isotope ratios. This database contains the resulting data and associated...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Ambient Monitoring,
Aquatic Biology,
Aquatic Community Health,
Ecosystem Health,
Environmental Health,
These data were collected from the TOPGUN-SODA10 2AK core collected in 2010 by LacCore (University of Minnesota), the USGS. and the University of California (U.C.) Berkeley. The 8.9 meter length core had stable isotopes of oxygen and carbon sampled every 10 millimeters or so, and diatoms samples at every 50 millimeters to 200 millimeters depending on the depth in the core. mineralogic data were collected using X-ray diffraction and grain-size analysis were done at various depths. These data are used to interpret the Holocene and late Pleistocene hydrology and paleoclimate of the lake and the region. The interpretation can be found in: Rosen, M.R., Reidy, L., Starratt, S., Zimmerman, S., in review, Middle Holocene...
Categories: Data;
Tags: Aquatic Biology,
Big Soda Lake,
Central Nevada Desert Basins,
Climatology,
Diatoms,
This dataset is a compilation of Longfin Smelt observations from multiple sources, including research institutions and museums, and local, state, and federal fisheries agencies.
Physical and chemical changes affect the biota within urban streams at varying scales ranging from individual organisms to populations and communities creating complex interactions that present challenges for characterizing and monitoring the impact on species utilizing these freshwater habitats. Salmonids, specifically cutthroat trout (Oncorhynchus clarkii) and coho salmon (Oncorhynchus kisutch), extensively utilize small stream habitats influenced by a changing urban landscape. This study used a comprehensive fish health assessment concurrent with the U.S. Geological Survey’s Pacific Northwest Stream Quality Assessment in 2015 to quantifiy impacts from disease in juvenile coho and cutthroat salmon, impacts to...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Bioenergtics,
Church Creek,
Coulter Creek,
East Fork Dairy Cree,
To support research on remote sensing of rivers, hyperspectral image data and supporting field measurements of water depth obtained with a multibeam echosounder were acquired from a segment of the Kootenai River in northern Idaho, September 26 and 27, 2017. These data sets also facilitate efforts to characterize in-stream habitat for sturgeon, understand and model dispersion processes, and monitor geomorphic change along the Kootenai River. This parent data release includes links to child pages for the following data sets: 1) airborne hyperspectral image data acquired from a conventional, manned, fixed-wing aircraft; 2) ground-based depth measurements obtained during a multibeam echosounder survey; and 3) in...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Bathymetry,
Geomorphology,
Idaho,
Kootenai River,
Benthic diatom assemblages are known to be indicative of water quality but have yet to be widely adopted in biological assessments in the United States due to several limitations. Our goal was to address some of these limitations by developing regional multi-metric indices (MMIs) that are robust to inter-laboratory taxonomic inconsistency, adjusted for natural covariates, and sensitive to a wide range of anthropogenic stressors. We aggregated bioassessment data from two national-scale federal programs and used a data-driven analysis in which all-possible combinations of 2-7 metrics were compared for three measures of performance. The datasets in this release support the Carlisle, et al. 2022 report cited herein....
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Ecology,
USGS Science Data Catalog (SDC),
Water Quality,
algae,
A total of 27 temperature sensors were deployed along the lower 90 miles of the Yakima River at 7 locations where cold water had been previously observed. These 7 cold-water areas had 3 to 6 temperature sensors installed to document the extent and duration of these cold-water areas and their impacts on mainstem temperatures of the Lower Yakima River. Cold-water areas included the mouths of tributaries, alongside channels, and within alcoves. Sensor deployments ranged from 1 to 2 years beginning in October 2018. All temperature data are included in the Yakima.temperatures.zip folder. Details of each monitoring location are provided in the site.locs.csv file. In addition to the raw data and site location information,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Benton County,
Ecology,
Hydrology,
Richland, WA,
The Fluvial Egg Drift Simulator (FluEgg) estimates bighead, silver, and grass carp egg and larval drift in rivers using species-specific egg developmental data combined with user-supplied hydraulic inputs (Garcia and others, 2013; Domanski, 2020). This data release contains results from 240 FluEgg 4.1.0 simulations of bighead carp eggs in the Illinois River under steady flow conditions. The data release also contains the hydraulic inputs used in the FluEgg simulations and a KML file of the centerline that represents the model domain. FluEgg simulations were run for all combinations of four spawning locations, six water temperatures, and ten steady flow conditions. Each simulation included 5,000 bighead carp eggs,...
Daily lake surface temperatures estimates for 185,549 lakes across the contiguous United States from 1980 to 2020 generated using an entity-aware long short-term memory deep learning model. In-situ measurements used for model training and evaluation are from 12,227 lakes and are included as well as daily meteorological conditions and lake properties. Median per-lake estimated error found through cross validation on lakes with in-situ surface temperature observations was 1.24 °C. The generated dataset will be beneficial for a wide range of applications including estimations of thermal habitats and the impacts of climate change on inland lakes.
Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey (USGS), in cooperation with the U.S. Environmental Protection Agency.
Categories: Data;
Tags: Aquatic Biology,
Clark Fork Basin,
Environmental Health,
Geochemistry,
Hydrology,
This metadata record presents analytical results for laboratory microcosms conducted during 2016–18 as part of a study to develop a field test and numerical interpretation method to determine the effective diffusion coefficients and sorption coefficients of trichloroethene (TCE) and daughter products in the rock matrix of sedimentary rock, as well as biodegradation rate coefficients in the borehole. The biodegradation rate coefficients in the borehole are an important component of defining the back-diffusion of TCE from the matrix of sedimentary rock. Microcosm experiments were conducted with microbial community samples and groundwater collected from boreholes in the field test area to define anaerobic biodegradation...
The Bonnet Carré Spillway (BCS), located about 28 miles northwest of New Orleans, was constructed by the US Army Corp of Engineers in the early 1930s as part of an integrated flood-control system for the lower Mississippi River (MR). The BCS control structure consists of 350 individual bays that can be opened to divert water from the river to Lake Pontchartrain to relieve pressure on downstream levees. Lake Pontchartrain (LP) is hydrologically connected to the Mississippi Sound (MS Sound) and the Gulf of Mexico and is more accurately characterized as an estuarine embayment. BCS openings have occurred twelve times prior to 2019 because of high Mississippi River stages, typically in late spring. In 2019, the spillway...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
USGS Science Data Catalog (SDC),
Water Quality,
Water Resources
Benthic invertebrate communities are monitored because the composition of those communities can affect and be affected by the water quality of an aquatic system. Benthic communities use and sometimes regulate the cycling of essential elements (for example, carbon). Benthic invertebrate taxa may also indicate acute and chronic stressors in an environment because they accumulate contaminants and can respond – sometimes dramatically - to oligotrophic and eutrophic conditions. Benthic communities affect water quality by grazing pelagic food resources and increasing the rate of nutrient regeneration through feeding and bioturbating sediments. South San Francisco Bay is a system dependent on phytoplankton as the base...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alviso Slough,
Annelids,
Aquatic Biology,
Benthic Ecosystems,
Benthos,
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