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This dataset consists of physics-based Delft3D model and Delwaq model input files used in modeling sediment deposition and concentrations around the coral reefs of west Maui, Hawaii. The Delft3D models were used to simulate waves and currents under small (SC1) and large (‘SC2’) wave conditions for current stream discharge (‘Alt1’) and stream discharge with watershed restoration (‘Alt3’). Delft3D model results were subsequently used as forcing conditions for Delwaq models to simulate sediment transport and dispersion. The Delwaq models were used to simulate sediment transport and concentrations under the same two wave and stream discharge scenarios. The Delwaq models were run using forcing conditions generated by...
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Environmental Health,
Geography,
Geomorphology,
This data release includes representative cluster profiles (RCPs) from a large (>24,000) selection of coral reef topobathymetric cross-shore profiles (Scott and others, 2020). We used statistics, machine learning, and numerical modelling to develop the set of RCPs, which can be used to accurately represent the shoreline hydrodynamics of a large variety of coral reef-lined coasts around the globe. In two stages, the data were reduced by clustering cross-shore profiles based on morphology and hydrodynamic response to typical wind and swell wave conditions. By representing a large variety of coral reef morphologies with a reduced number of RCPs, a computationally feasible number of numerical model simulations can be...
Categories: Data;
Types: NetCDF OPeNDAP Service;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Commonwealth of the Northern Mariana Islands,
Marine Geology,
PCMSC,
Here we present surface current results from a physics-based, 3-dimensional coupled ocean-atmosphere numerical model that was generated to understand coral larval dispersal patterns in Maui Nui, Hawaii, USA. The model was used to simulate coral larval dispersal patterns from a number of existing State-managed reefs and large tracks of reefs with high coral coverage that might be good candidates for marine-protected areas (MPAs) during 8 spawning events during 2010-2013. The goal of this effort is to provide geophysical data to help provide guidance to sustain coral health in Maui Nui, Hawaii, USA. Each model output run is available as a netCDF file with self-contained attribute information. Each file name is appended...
Categories: Data;
Types: Citation,
Map Service,
NetCDF OPeNDAP Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: CMGP,
Coastal and Marine Geology Program,
Geophysics,
Hawaii,
Kahoolawe,
This model archive makes available the U.S. Geological Survey Soil-Water-Balance (SWB) model created in support of a groundwater flow model of the former Badger Army Ammunition Plant in Sauk County, Wisconsin. The SWB model provides initial estimates of potential recharge to the groundwater system in the study area, which are used in a calibrated 3-dimensional MODFLOW (modular finite-difference flow) model. The SWB and MODFLOW models run from 1980 to 2020. The model incorporates changing land use, and changes reflecting the decomissioning of the plant (changing urban back to non-urbanized). SWB output is broken up into 50 model timesteps for the MODFLOW model.
This data set consists of physics-based Delft3D-FLOW and SWAN hydrodynamic models input files used to study the wave-induced 3D flow over spur-and-groove (SAG) formations. SAG are a common and impressive characteristic of coral reefs. They are composed of a series of submerged shore-normal coral ridges (spurs) separated by shore-normal patches of sediment (grooves) on the fore reef of coral reef environments. Although their existence and geometrical properties are well documented, the literature concerning the hydrodynamics around them is sparse. Here, the three-dimensional flow patterns over SAG formations, and a sensitivity of those patterns to waves, currents, and SAG geometry were examined. Shore-normal shoaling...
A one- and two-dimensional hydrodynamic model of the San Francisco Bay and Delta was constructed using the Delft3D Flexible Mesh Suite (Delft3D FM; Kernkamp and others, 2011; https://www.deltares.nl/en/software/delft3d-flexible-mesh-suite/) to simulate still water levels. Required model input files are provided to run the model for the time period from October 1, 2018, to April 30, 2019. This data release describes the construction and validation of the model application and provides input files suitable to run the model on Delft3D FM Suite 2020.04. Model Description The San Francisco Bay and Delta Still Water Level Model (SFBD-SWL) utilizes the open-source Delft3D Flexible Mesh Suite (Delft3D FM; Kernkamp and...
Dynamically downscaled future wave projections from SWAN model results for the main Hawaiian Islands
Projected wave climate trends from WAVEWATCH3 model output were used as input for nearshore wave models (for example, SWAN) for the main Hawaiian Islands to derive data and statistical measures (mean and top 5 percent values) of wave height, wave period, and wave direction for the recent past (1996-2005) and future projections (2026-2045 and 2085-2100). Three-hourly global climate model (GCM) wind speed and wind direction output from four different GCMs provided by the Coupled Model Inter-Comparison Project, phase 5 (CMIP5), were used as boundary conditions to the physics-based WAVEWATCH3 numerical wave model for the area encompassing the main Hawaiian islands. Two climate change scenarios for each of the four GCMs...
A set of physics-based XBeach Non-hydrostatic hydrodynamic model simulations (with input files here included) were used to evaluate how varying carbonate budgets, and thus coral reef accretion and degradation, affect alongshore variations in wave-driven water levels along the adjacent shoreline of Buck Island Reef National Monument (BUIS) for a number of sea-level rise scenarios, specifically during extreme wave conditions when the risk for coastal flooding and the resulting impact to coastal communities is greatest. These input files accompany the modeling conducted for the following publication: Toth, L.T., Storlazzi, C.D., Kuffner, I.B., Quataert, E., Reyns, J., McCall, R.T., Stathakopoulos, A., Hillis-Starr,...
Categories: Data;
Tags: Bathymetry and Elevation,
CMHRP,
Climatology,
Coastal and Marine Hazards and Resources Program,
Ecology,
Simulatations of water levels in the Salish Sea for a continuous hindcast of the period October 1, 1985, to September 30, 2015 were conducted to evaluate the utility and skill of a sea-level anomaly predictor and to develop extreme water level estimates accounting for decadal climate variability. The model accounts for sea level position, tides, remote sea-level anomalies, local winds and storm surge and stream flows as they affect water density. Comparison of modeled and measured water levels showed the model predicts extreme water levels at NOAA tide gage stations within 0.15 m. Model inputs and outputs of time-series water levels along the -5 m depth isobath are presented. In addition, extreme water level recurrence...
Categories: Data;
Tags: CMHRP,
Climate Change,
Coastal and Marine Hazards and Resources Program,
Distributions,
Extreme Weather,
This model archive contains the model files for the MERAS 3 and Mississippi Delta groundwater flow models documented in the U.S. Geological Survey Scientific Investigations Report 2023-5100. The MERAS 3 model provides a simplified representation of groundwater flow in the Mississippi Embayment Regional Aquifer Study (MERAS) area for the period of 1900 through 2018, with the primary goal of providing boundary fluxes for inset models focused on local areas of interest. The Mississippi Delta model simulates groundwater flow in the Delta region of northwestern Mississippi from 1900 through 2018, using boundary fluxes from the MERAS 3 model. A scenario version of the Mississippi Delta model extends the simulation to...
A process-based wave-resolving hydrodynamic model (XBeach Non-Hydrostatic, ‘XBNH’) was used to create a large synthetic database for use in a “Bayesian Estimator for Wave Attack in Reef Environments” (BEWARE), relating incident hydrodynamics and coral reef geomorphology to coastal flooding hazards on reef-lined coasts. Building on previous work, BEWARE improves system understanding of reef hydrodynamics by examining the intrinsic reef and extrinsic forcing factors controlling runup and flooding on reef-lined coasts. The Bayesian estimator has high predictive skill for the XBNH model outputs that are flooding indicators, and was validated for a number of available field cases. BEWARE is a potentially powerful tool...
Categories: Data;
Types: Citation,
NetCDF OPeNDAP Service;
Tags: CMGP,
Coastal and Marine Geology Program,
Geomorphology,
Geophysics,
PCMSC,
Schematic atoll models with varying theoretical morphologies were used to evaluate the relative control of individual morphological parameters on alongshore transport gradients. Here we present physics-based numerical SWAN model results of incident wave transformations for a range of atoll and island morphologies and sea-level rise scenarios. Model results are presented in NetCDF format, accompanied by a README text file that lists the parameters used in each model run. These data accompany the following publication: Shope, J.B., and Storlazzi, C.D., 2019, Assessing morphologic controls on atoll island alongshore sediment transport gradients due to future sea-level rise: Frontiers in Marine Science, doi:10.3389/fmars.2019.00245.
This data release contains gridded bathymetry data from repeated multibeam sonar surveys and input files for a hydrodynamic and sediment transport model application of the mouth of the Columbia River (MCR), Oregon and Washington. The bathymetry data were collected by the U.S. Army Corps of Engineers Portland District Surveys Section between September 9, 2020, and March 10, 2021, to characterize the morphology and dispersal of a nearshore berm composed of 216,000 m3 of sand-sized sediment that was dredged from the MCR navigation channel and placed on the northern flank of the ebb-tidal delta in water depths between 12 and 15 m. Observations of berm morphology were compared with predictions from a three-dimensional...
Categories: Data;
Tags: CMHRP,
Coastal and Marine Hazards and Resources Program,
Geomorphology,
PCMSC,
Pacific Coastal and Marine Science Center,
Simulations of water levels in the Salish Sea over the period October 1, 2016 to September 30, 2020 were conducted to validate the Salish Sea hydrodynamic model. The model accounts for sea level position, tides, remote sea-level anomalies, local winds and storm surge and stream flows as they affect water density. Comparison of modeled and measured water levels showed the model predicts extreme water levels at NOAA and USGS tide gage stations within 0.15 m. Model inputs and outputs of time-series forcing and water levels, respectively, are presented.
Categories: Data;
Tags: CMHRP,
Climate Change,
Coastal and Marine Hazards and Resources Program,
Distributions,
Extreme Weather,
We developed the HyCReWW metamodel to predict wave run-up under a wide range of coral reef morphometric and offshore forcing characteristics. Due to the complexity and high dimensionality of the problem, we assumed an idealized one-dimensional reef profile, characterized by seven primary parameters. XBeach Non-Hydrostatic was chosen to create the synthetic dataset and Radial Basis Functions implemented in Matlab were chosen for interpolation. Results demonstrate the applicability of the metamodel to obtain fast and accurate results of wave run-up for a large range of intrinsic coral reef morphologic and extrinsic hydrodynamic forcing parameters, offering a useful tool for risk management and early warning systems....
This data release includes the XBeach input data files used to evaluate the importance of explicitly modeling sea-swell waves for runup. This was examined using a 2D XBeach short wave-averaged (surfbeat, XB-SB) and a wave-resolving (non-hydrostatic, XB-NH) model of Roi-Namur Island on Kwajalein Atoll in the Republic of Marshall Islands. Results show that explicitly modelling the sea-swell component (using XB-NH) provides a better approximation of the observed runup than XB-SB (which only models the time-variation of the sea-swell wave height), despite good model performance of both models on reef flat water levels and wave heights. However, both models under-predict runup peaks. The difference between XB-SB and...
Using global climate model projections of sea-surface temperature at coral reef sites, we modeled the effects of depth and exposure to semidiurnal temperature fluctuations to examine how these effects may alter the projected year of annual severe bleaching for coral reef sites globally. Here we present the first global maps of the effects these processes have on bleaching projections for three IPCC-AR5 emissions scenarios.
This data set consists of physics-based Delft3D-FLOW and WAVE hydrodynamic models input files used for Coastal Storm Modeling System (CoSMoS) Tier 1 simulations. Tier 1 simulations cover the Northern California open-coast region, from the Golden Gate Bridge to the California/Oregon state border, and they provide boundary conditions to higher-resolution simulations. Simulations are run for several storm events (covering a range of no storm, 1-year, 20-year, and 100-year coastal storm conditions) and sea-level rise (SLR) scenarios.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Beaches,
CMHRP,
Climate Change,
ClimatologyMeteorologyAtmosphere,
Coastal and Marine Hazards and Resources,
This model archive contains files for a set of groundwater flow, particle tracking, and management optimization models that simulate the area around the Navy-Northrop-Grumman contamination plume on Long Island, New York. These models were developed as in insets from the Long Island Regional “parent” Model, from which perimeter boundary conditions were inherited. In addition to input and output files for these models, this archive contains the modeling workflow python code and source data used to build the model. These materials have been included for repeatability and decision transparency.
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Bethpage,
Groundwater,
Hydrology,
Long Island,
Long Island West,
This data release provides a wave model application and wave parameters derived from simulations of a schematized ancient lake on Mars. The phase-averaged wave model, SWAN, was applied within the Delft3D modeling system (Deltares, 2018) with reduced gravity and a range of atmospheric densities and wind speeds to simulate potential conditions that could generate wind waves on Mars. Wave modeling presented in this data release was combined with analysis of sedimentary structures observed in imagery collected by the Mars rover Curiosity to determine whether four examples of symmetrical, reversing, or straight-crested bedforms in Gale Crater sandstones are preserved wave ripples (Rubin and others, 2022). The presence...
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