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To investigate the effects of imidacloprid on natural stream communities under controlled conditions, experimental streams were dosed with imidacloprid at concentrations ranging from 0.061 to 220 micrograms per liter (µg/L) for a period of 10 days. Natural stream macroinvertebrate communities were obtained from the Cache La Poudre River (Larimer County, CO) by colonizing trays full of large gravel for 75 days. The trays were added to laboratory experimental streams (mesocosms) at the USGS Fort Collins Science Center in Fort Collins, CO. At the end of 10 days, invertebrate abundance metrics were analyzed in relation to measured imidacloprid concentrations in water from the experimental streams. Declines in total...
This dataset consists of measurements of the digestive gland in the freshwater snail Lymnaea stagnalis orally exposed to uranium. The objective of the study was to assess the morphological effects of uranium on the snail digestive gland by light microscopy. Laboratory-cultured L stagnalis were exposed to either synthetic or natural solid phases of uranium and a subset (6 controls and 6 exposed) were euthanized and fixed in 10% neutral buffered formalin for histopathological assessment. Slides were processed and stained with hematoxalin and eosin as per standard procedure (Luna 1968). The size of each sample, the length and width of digestive gland tubules (5 random glands per sample) and height of digestive cells...
Categories: Data;
Tags: Environmental Health,
Lymnaea stagnalis,
Madison, Wisconsin,
USGS Science Data Catalog (SDC),
Wildlife Biology,
The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide...
Five principal components are used to represent the climate variation in an original set of 12 composite climate variables reflecting complex precipitation and temperature gradients. The dataset provides coverage for future climate (defined as the 2040-2070 normal period) under the RCP4.5 emission scenarios. Climate variables were chosen based on their known influence on local adaptation in plants, and include: mean annual temperature, summer maximum temperature, winter minimum temperature, annual temperature range, temperature seasonality (coefficient of variation in monthly average temperatures), mean annual precipitation, winter precipitation, summer precipitation, proportion of summer precipitation, precipitation...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
California,
Colorado,
Colorado Plateau,
Great Basin,
This Benthic Invertebrate Community Analysis dataset, a conceptual subgroup of the Lake Erie Ecological Investigations (LEEI) dataset, focuses on the benthic invertebrates sampled at Areas of Concern (AOCs) on Lake Erie. Per the Quality Assurance Project Plan (QAPP), the invertebrate samples were taken from sediments remaining from the sediment analysis. Identification of the invertebrates was completed by the same invertebrate taxonomist for both the 1998-2000 evaluation and 1986-87 historical evaluation (Smith et al. 1994) for increased consistency. Oligochaetes were identified to species if possible, chironomids were identified to genus, as adult specimens are needed for specific identification, and other taxa...
Climate Distance Mapper is an interactive web mapping application designed to facilitate informed seed sourcing decisions and to aid in directing regional seed collections. Implemented as a shiny web application (Chang et al. 2017), Climate Distance Mapper is hosted on the web at: https://usgs-werc-shinytools.shinyapps.io/Climate_Distance_Mapper/. The application is designed to guide restoration seed sourcing in the desert southwest by allowing users to interactively match seed sources with restoration sites climatic differences – in the form of multivariate climate distance values – between restoration sites and the surrounding landscape. Climatic distances are based on a combination of variables likely to influence...
Five principal components are used to represent the climate variation in an original set of 12 composite climate variables reflecting complex precipitation and temperature gradients. The dataset provides coverage for future climate (defined as the 2040-2070 normal period) under the RCP8.5 emission scenarios. Climate variables were chosen based on their known influence on local adaptation in plants, and include: mean annual temperature, summer maximum temperature, winter minimum temperature, annual temperature range, temperature seasonality (coefficient of variation in monthly average temperatures), mean annual precipitation, winter precipitation, summer precipitation, proportion of summer precipitation, precipitation...
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Arizona,
California,
Colorado,
Colorado Plateau,
Great Basin,
All gillnet data represented here expand upon vessel operations (OP table) data, all of which are collected by the United States Geological Survey, Great Lakes Science Center and its partners. The Gillnet Tables contain data collected from the research vessel deploying various gear used for gillnet data collection. The database uses sample_type to indicate the gear deployed. The tables relating to Gillnet are: GN_Annulus.csv, GN_Catch.csv, GN_Effort.csv, GN_Fish.csv, GN_L, GN_LF.csv, GN_OP.csv, GN_Prey.csv, GN_Stomach.csv, LMMB_Fish_Prey.csv, and LMMB_Invert_Prey.csv Data Quality: Note that the following data release is a snapshot of the database at the time of release. Some data quality checks are still being...
Zebra and quagga mussel veligers were exposed to eleven distinct cultures (isolates) of cyanobacteria representing Anabaena, Aphanizomenon, Dolichospermum, Microcystis, and Planktothrix species and the cyanotoxin microcystin to determine the lethality of cyanobacteria on dreissenid veligers. Six-day laboratory bioassays were performed in microplates using dreissenid veligers collected from the Detroit River, Michigan, USA. Veligers were exposed to increasing concentrations of cyanobacteria and microcystin using the green algae Chlorella minutissima as a control. Raw data were fit to dose response curves formulated from a Probit model to calculate LC50 values. This data release presents the raw data summarized and...
Climatic data are from Daymet (Thornton and others, 2016) and include maximum daily air temperature and total daily precipitation on a 1-km resolution; these data replace and update the original climate data used for the tool (Williamson and others, 2009).
This dataset is part of the U.S. Geological Survey (USGS) Great Lakes Coastal Wetland Restoration Assessment (GLCWRA) initiative. These data represent the flowline network in the Green Bay Restoration Assessment (GBRA). It is attributed with the number of disconnections (e.g., road crossings) between the reach and Lake Ontario. The more road crossings on a flowline the more disconnected that area is from the lake and the less suitable it will be for restoration. These data help identify the condition of hydrologic separation between potential restoration areas and Lake Ontario. Low numbers represent fewer disconnections, such as culverts, between the reach and the water body requiring no flow network modification...
These data were compiled to provide a resource for other researchers interested in water-surface elevations and flow velocity across a wide range of discharge in the study reach for the project. Objective(s) of our study were to construct a two-dimensional hydrodynamic model for the 15.8 mile tailwater reach of the Colorado River in Glen Canyon between Glen Canyon Dam and Lees Ferry, Arizona. These data represent the results of the two-dimensional modeling effort with each data table (50) including the results of each run of the model. Additionally, other data represent a comparison of modeled water surface elevations to measured water surface elevations for historic Bureau of Reclamation cross sections in the study...
This data release links benthic macroinvertebrate sites to both the NHDPlus Version 2 and NHDPlus High Resolution Region 02 networks, hereafter referred to as V2 and HR, using the hydrolink methodology. Linked benthic macroinvertebrate sites are those included in the Chesapeake Bay Basin-wide Index of Biotic Integrity (Chessie BIBI) developed by the Interstate Commission on the Potomac River Basin (ICPRB) and available from the Chesapeake Bay Program (https://datahub.chesapeakebay.net/LivingResources). The data set contains a unique sample identifier created by ICPRB, survey program, coordinates of sample, linked V2 COMID and HR Permanent Identifier, and information regarding uncertainty in the attribution. We strongly...
Categories: Data;
Tags: Aquatic Biology,
District of Columbia (national district),
Ecology,
Hydrology,
Maryland (state),
In order to allow for a comparison across years we visually digitized landcover of Poplar Island from a single image per year at a 1:1000 spatial extent with a minimum mapping unit of 300 square meters (no minimum dimensions aside from area). Images used to assign landcover were provided by the U.S. Army Corps of Engineers and were captured between July and October of their respective years. All images were 1 foot resolution.
Categories: Map;
Tags: Chesapeake Bay,
Chesapeake Bay,
Digitizing,
Ecology,
Geographic Information Systems,
To address the data and information gap for characterizing coastal drought, a coastal salinity index (CSI) was developed using salinity data (Conrads 2016; Conrads and Darby, 2017). The CSI uses an approach similar to the Standardized Precipitation Index (SPI), a readily available drought index that is widely used for monitoring meteorological droughts (McKee and others, 1993). The CSI substitutes total monthly precipitation with monthly mean salinity data to determine the probability of recording a given salinity value in a particular month. The initial investigation demonstrated that the index could be used to delineate short- and long-term drought (saline) and wet (high freshwater inflow) conditions; however,...
Categories: Data;
Tags: Everglades National Park,
USGS Science Data Catalog (SDC),
brackish,
ecology,
estuary,
In May 2021, the Grand Canyon Monitoring and Research Center (GCMRC) of the U.S. Geological Survey’s (USGS), Southwest Biological Science Center (SBSC) acquired airborne multispectral high resolution data for the Colorado River in Grand Canyon in Arizona, USA. The imagery data consist of four bands (Band 1 – red, Band 2 – green, Band 3 – blue, and Band 4 – near infrared) with a ground resolution of 20 centimeters (cm). These image data are available to the public as 16-bit GeoTIFF files, which can be read and used by most geographic information system (GIS) and image-processing software. The spatial reference of the image data are in the State Plane (SP) map projection using the central Arizona zone (FIPS 0202)...
These data were compiled for evaluating plant water use, or river-reach level evapotranspiration (ET) data, in the riparian corridor of the Colorado River delta as specified under Minute 319 of the 1944 Water Treaty. Additionally, these data were compiled for evaluating restoration-level data in Reach 2 and Reach 4, as specified under Minute 323 of the 1944 Water Treaty. Objectives of our study were to measure the peak growing season evapotranspiration (ET) for the average of months in summer-fall (May to October) for the seven reaches, for the full riparian corridor, and for four restoration sites, from 2013 through 2022. The seven reach areas from the Northerly International Boundary (NIB) to the end of the delta...
These data were compiled for a study that investigated the effects of drought seasonality and plant community composition in a dryland ecosystem. In 2015 U.S. Geological Survey ecologists recorded vegetation and soil moisture data in 36 experimental plots which manipulated precipitation in two plant community types. The experiment consisted of three precipitation treatments: control (ambient precipitation), cool-season drought (-66% ambient precipitation November-April), and warm-season drought (-66% ambient precipitation May-October), applied in two plant communities (perennial grasses with or without a large shrub, Ephedra viridis) over a three-year period. These data were collected from 2015 to 2022 near Canyonlands...
Categories: Data;
Tags: Achnatherum hymenoides,
Botany,
C3 photosynthesis,
C4 photosynthesis,
Canyonlands National Park,
This data release is currently being revised and is temporarily unavailable. Please contact rhkent@usgs.gov with any immediate requests. The U.S. Geological Survey Groundwater Ambient Monitoring and Assessment-Priority Basin Project (USGS GAMA-PBP) collected samples to be analyzed for per-and polyfluoroalkyl substances (PFAS) from domestic and public supply wells from May 2019 to September 2020. The datasets presented here include identification of the 28 PFAS constituents monitored by the project, Identification and brief characterization of the 211 GAMA-PBP wells for which samples were analyzed for PFAS during the study period, and analytical results for those groundwater samples, along with results for quality...
Categories: Data;
Tags: California,
Colusa County,
Environmental Health,
Geochemistry,
Humboldt County,
Three regression models were developed for describing variability of host-specific flux data in eight Great Lakes tributaries. Models include one for Lachnospiraceae flux, one for human bacteroides flux, and one for ruminant bacteroides flux. Models were developed using the R project for statistical computing with core functionality and the survival, smwrBase, and smwrQW packages. Predictor variables for these models are included in the data file and input files provided. These include sampling dates and times, rainfall depth, percent of watershed underlain by tile drainage, cattle population (for the ruminant marker model) and human population (for the human marker models). Sample collection and laboratory analyses...
Categories: Data;
Tags: Bacteria,
Great Lakes Region,
Regression analysis,
Surface water quality,
USGS Science Data Catalog (SDC)
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