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The data set contains the results of experimental challenge of captive zebra finches with an American crow isolate of West Nile virus (WNV). Data include infectivity, mortality, viremia, oral shedding of virus, and serology for anti- WNV antibodies. Australian and Timor zebra finches were used in this study and both are useful as a laboratory model of an avian species with moderate susceptibility to WNV.
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The point data file ("Soda Fire Point and Pasture Data (2016).Point Data.csv") includes 2016 vegetative cover values of exotic annual grass and perennial grass measured within three different types of plots for 75 pastures in the Soda Fire, which burned in 2015: 6m² plot using a grid-point intercept photo software, SamplePoint (Booth et al. 2006), 1m² quadrat using an unguided rapid ocular estimate in the field, 531m² circular plot using an unguided rapid ocular estimate in the field. Smaller plots were nested within larger plots. The pasture data file ("Soda Fire Point and Pasture Data (2016).Pasture Data.csv") includes pasture level metrics of area, elevation, precipitation, slope, heatload, soils, and herbicide...
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This ESRI geodatabase consists of 5 feature datsets with 23 individual polygon feature classes and two raster datasets. A master campsite polygon feature class represents the boundaries of campsites identified in the 1973, 1984, and 1991 campsite inventories of the Colorado River corridor in Grand Canyon, Arizona. The other polygon feature classes represent camp locations along the Colorado River corridor in Grand Canyon, Arizona during different survey periods using different surveying techniques. The raster datasets represent sub-aerial and sub-surface sandbar surfaces at 37 long term-monitoring sites between Lees Ferry and Diamond Creek, Arizona in Grand Canyon National Park, measured in September and October...
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This dataset provides supporting information for the species distribution data used in the associated manuscript. Collections of five non-native fish species were made by a number of institutions, and several capture techniques were used. This dataset also includes number of individuals of each species captured at each locality.
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Mangrove restoration has a strong potential to enhance the services provided by coastal wetlands on a number of Department of the Interior (DOI) managed lands throughout the southeastern United States of America. Services include storm protection, water quality improvement, and biological carbon sequestration. Forest structural attributes including basal area, tree height, and stem density by species are used to calculate above ground biomass and above ground productivity. Percent cover is used to asses the forest canopy health. The data collected for the soils are: bulk density, percent total Nitrogen, percent total Carbon, and selected samples percent total Phosporus. The forest structure plots were placed in...
This data set is associated with an administrative report submitted to the U.S. Food and Drug Administration Center for Veterinary Medicine (CVM). The project goal was to determine the effects of hydrogen peroxide on the microflora of recirculating aquaculture systems (RAS). There are few aquaculture drugs approved for use in RAS and the CVM will evaluate findings from the study to determine if hydrogen peroxide would be safe to use in RAS.
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This data set consists of monthly averages of soil and litter properties. Rows are grouped in the following order: year, month, vegetation type, plot ID. Within a single month five plots were sampled within each of the 2 vegetation types (10 plots total). Columns F+ represent individual measurements.
Increased nutrient and sediment loading have caused observable changes in algal community composition, and thereby, altered the quality and quantity of food resources available to native freshwater mussels. Our objective was to characterize the relationship between nutrient conditions and mussel food quality and examine the effects on the fatty acid composition, growth and survival of juvenile mussels. Juvenile Lampsilis cardium and L. siliquoidea were deployed in cages for 28 d at four riverine and four lacustrine sites in the lower St. Croix River, Minnesota/Wisconsin, USA. Mussel foot tissue and food resources (four seston fractions and surficial sediment) were analyzed for quantitative fatty acid (FA) composition....
To help determine whether Hg had a causal effect on corticosterone, we investigated the impact of experimental Hg intake on the corticosterone stress response in captive juvenile loons. Juveniles were subjected to three different feeding regimes: 0, 0.4 and 1.2 µg Hg (as MeHgCL)/g wet weight (ww) fish. We then measured baseline and 30 min post-solitary confinement stressor corticosterone concentrations. The data set consists of times of blood draws and dietary Hg levels. Blood samples and data set were provided to the senior author for analysis.
Carbon dioxide (CO2) is under consideration as a chemical fish deterrent at pinch points in rivers (e.g., inside locks) to reduce unwanted fish passage. This study evaluated the behavioral responses of invasive round goby (Neogobius melanostomus) to dissolved CO2 in laboratory tanks. The goal of this project was to quantify CO2 concentrations that modify round goby behavior. More specifically, avoidance behavior (voluntary response) and loss of equilibrium (involuntary response) were quantified across 5, 15, and 25°C water temperatures. These data can be used to inform future field testing of CO2 as an invasive fish deterrent. Spreadsheets include data that were used to evaluate the efficacy of carbon dioxide (CO2)...
The table provides all fish collected using two different electrofishing methods at Illinois River sites in 2012 and 2013. Length and weights were taken on most species and gender was taken from Silver Carp. Fishes were categorized whether they were netters (caught by nets) or jumpers (jumped in the boat while sampling) and only netters were used in analyses. Large numbers of shad were collected in 2013 and an additional spreadsheet includes abundance data in an aggregated form for those sites. The data is not sensitive/classified and there are no legal restrictions on who may obtain or use the data.
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Invasive species may vary in their seasonal distribution and abundance due to environmental conditions such as precipitation and temperature. Bigheaded carps, which include silver and bighead carp, are one such taxon of invasive species that appear to change habitats seasonally. Seasonal changes in bigheaded carp distribution may occur because of hydrological changes, water temperature changes, and spawning activities. Monitoring this seasonal dispersal and migration is important for management to control the population size and spread of the species. We examined if environmental DNA (eDNA) approaches could detect seasonal changes in the occurrence of DNA in water samples and used these approaches to calculate the...
Interest in the field of environmental DNA (eDNA) is growing rapidly and eDNA surveys are becoming an important consideration for aquatic resource managers dealing with invasive species. However, in order for eDNA monitoring to mature as a research and management tool, there are several critical knowledge gaps that must be filled. One such gap is the fate of eDNA materials in the aquatic environment. Understanding the environmental factors that influence the decay of eDNA and how these factors impact detection probabilities over time and space could have significant implications for eDNA survey design and data interpretation. Here we experimentally explore eDNA decay in waste materials and reproductive cells obtained...
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Intracoelomic implantation of electronic tags has become a common method in fishery research, but rarely are fish examined by scientists after release to understand the extent that surgical incisions have healed. Walleye (Sander vitreus) are a valuable, highly-exploited fishery resource in the Laurentian Great Lakes. Here, fishery capture of walleye with internal acoustic transmitters combined with a high reward program provided multiple opportunities to examine photographs and quantify the status of surgical incisions. Walleye (n=926) from reef and river spawning populations in Lake Erie and Lake Huron were implanted with acoustic transmitters during spring spawning events from 2011 to 2016. Incisions were closed...
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From 2013 to 2015, bathymetric surveys of New York City’s six West of Hudson reservoirs (Ashokan, Cannonsville, Neversink, Pepacton, Rondout, and Schoharie) were performed to provide updated capacity tables and bathymetric maps. Depths were surveyed with a single-beam echo sounder and real-time kinematic global positioning system (RTK-GPS) along planned transects at predetermined intervals for each reservoir. A separate set of echo sounder data was collected along transects at oblique angles to the main transects for accuracy assessment. Field survey data was combined with water-surface elevations in a geographic information system to create three-dimensional surfaces representing reservoir-bed elevations in the...
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Acetylene fermentation assays, nitrogen fixation assays, and growth studies were performed with Pelobacter sp. strain SFB93 and Pelobacter acetylenicus DSM3246. Data includes concentrations of acetylene and ethylene over time, and growth measured with OD680 and cell counts.
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Physical and chemical changes affect the biota within urban streams at varying scales ranging from individual organisms to populations and communities creating complex interactions that present challenges for characterizing and monitoring the impact on species utilizing these freshwater habitats. Salmonids, specifically cutthroat trout (Oncorhynchus clarkii) and coho salmon (Oncorhynchus kisutch), extensively utilize small stream habitats influenced by a changing urban landscape. This study used a comprehensive fish health assessment concurrent with the U.S. Geological Survey’s Pacific Northwest Stream Quality Assessment in 2015 to quantifiy impacts from disease in juvenile coho and cutthroat salmon, impacts to...
Radio-collared wolves in the Superior National Forest that were killed by other wolves or probably killed by wolves between 1968 and 2014
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This dataset represents 25 parallel longitudinal profiles that were extracted from terrestrial lidar point clouds taken during six survey periods. The six lidar surveys were conducted between 7 October 2010 and 8 October 2013. Over that time a colluvial hollow eroded into a fluvial channel. The longitudinal profiles show the topography of the colluvial hollow for each survey period. The width of the original colluvial hollow was approximately 1.25 m, and a longitudinal profile was extracted every 5 cm for the entire length of the hollow, resulting in 25 parallel longitudinal profiles. These data can be used to observe the transition of the colluvial hollow to a fluvial channel and furthermore they show the development...
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Water-surface elevations were recorded by submerged pressure transducers in Spring, 2015 along the upper Willamette River, Oregon, between Eugene and Corvallis. The water-surface elevations were surveyed by using a real-time kinematic global positioning system (RTK-GPS) at each pressure sensor location. These water-surface elevations were logged over a small range of discharges, from 4,600 cubic feet per second to 10,800 cubic feet per second at Harrisburg, OR. These datasets were collected for equipment calibration and validation for the National Aeronautics and Space Administration’s (NASA) Surface Water and Ocean Topography (SWOT) satellite mission. This is one of multiple datasets that will be released for this...
map background search result map search result map Geospatial Bathymetry Dataset and Elevation-Area-Capacity Table for Neversink Reservoir, 2014 Seasonal trends in eDNA detection and occupancy of bigheaded carps, Wabash River, IN: Raw Data Water surface elevations recorded by submerged pressure transducers along the upper Willamette River, Oregon, Spring, 2015 Discovery of Two Biological Mechanisms for Acetylene Metabolism in a Single Organism Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Condition of Surgical Acoustic Tag Incisions in Recaptured Lake Erie Walleye (2011-2016) Effects of Flood Inundation and Invasion by Phalaris arundinacea on Nitrogen Cycling in an Upper Mississippi River Floodplain Forest data Baseline data for a hydrological restoration of a mangrove forest near Goodland, Florida (2015 - 2017) Geomorphology and Campsite Data, Colorado River, Marble and Grand Canyon, Arizona Fourmile Canyon Wildfire Longitudinal Profile Data Exotic and perennial grass cover for pastures in the Soda Fire (2016) Evaluating Coho Salmon in Streams Across an Urbanization Gradient—Part 1, Growth Potential Based on Environmental Factors and Bioenergetics Fourmile Canyon Wildfire Longitudinal Profile Data Baseline data for a hydrological restoration of a mangrove forest near Goodland, Florida (2015 - 2017) Geospatial Bathymetry Dataset and Elevation-Area-Capacity Table for Neversink Reservoir, 2014 Water surface elevations recorded by submerged pressure transducers along the upper Willamette River, Oregon, Spring, 2015 Distribution and status of five non-native fish species in the Tampa Bay drainage (USA), a hot spot for fish introductions-Data Discovery of Two Biological Mechanisms for Acetylene Metabolism in a Single Organism Exotic and perennial grass cover for pastures in the Soda Fire (2016) Geomorphology and Campsite Data, Colorado River, Marble and Grand Canyon, Arizona Condition of Surgical Acoustic Tag Incisions in Recaptured Lake Erie Walleye (2011-2016) Evaluating Coho Salmon in Streams Across an Urbanization Gradient—Part 1, Growth Potential Based on Environmental Factors and Bioenergetics Seasonal trends in eDNA detection and occupancy of bigheaded carps, Wabash River, IN: Raw Data