Filters: Types: OGC WFS Layer (X) > Tags: {"scheme":"USGS Thesaurus"} (X) > Types: OGC WMS Service (X) > partyWithName: Ecosystems (X)
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These data represent trapping effort and captures of deer mice at Point Reyes National Seashore, Marin County, California. Deer mice were captured and marked with ear tags to allow identification of individuals. The location of captures can be used in a spatially explicit capture recapture model to estimate density of mice and how mouse density varies by site and habitat type.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: California,
Ecology,
Marin County,
Point Reyes National Seashore,
USGS Science Data Catalog (SDC),
In Hawai‘i and other oceanic islands with few native land mammals, black rats (Rattus rattus) are among the most damaging invasive vertebrate species to native forest bird populations and habitats, due to their arboreal behavior and generalist foraging habitats and habitat use. This is a selected data set used to assess the impacts of rodenticide treatment on black rat (Rattus rattus) abundance within Hawaii Volcanoes National Park (HAVO). The key objective was to identify rat abundance before and after rodenticide treatment, using paired non-treatment and treatment plots at high elevation (1700-1830m) and low elevation (1220-1340 m). This dataset includes the results of a mark recapture study that took place within...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: BACI,
Hawaii,
Hawaii County 2,
Hawaii Volcanoes National Park,
Hawaii Volcanoes National Park,
This data set consists of monthly averages of soil and litter properties. Rows are grouped in the following order: year, month, vegetation type, plot ID. Within a single month five plots were sampled within each of the 2 vegetation types (10 plots total). Columns F+ represent individual measurements.
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Mississippi River,
Nitrogen cycling,
Pool 8,
USGS Science Data Catalog (SDC),
Upper Mississippi River,
Invasive species may vary in their seasonal distribution and abundance due to environmental conditions such as precipitation and temperature. Bigheaded carps, which include silver and bighead carp, are one such taxon of invasive species that appear to change habitats seasonally. Seasonal changes in bigheaded carp distribution may occur because of hydrological changes, water temperature changes, and spawning activities. Monitoring this seasonal dispersal and migration is important for management to control the population size and spread of the species. We examined if environmental DNA (eDNA) approaches could detect seasonal changes in the occurrence of DNA in water samples and used these approaches to calculate the...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Americus,
French Post,
Indiana,
Mascouten,
Occupancy modeling,
Daily HOBO Pro V.2 soil temperature measurements at the Great Dismal Swamp National Wildlife Refuge (2015-2017). Data collected in Great Dismal Swamp National Wildlife Refuge in Southern VA and Northern NC from 9 plot sites representing three general forest types: Atlantic White Cedar, Pocosin Pine, and Maple and Gum.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Climate,
Great Dismal Swamp National Wildlife Refuge,
Soil Sciences,
USGS Science Data Catalog (SDC),
Wetland
Intracoelomic implantation of electronic tags has become a common method in fishery research, but rarely are fish examined by scientists after release to understand the extent that surgical incisions have healed. Walleye (Sander vitreus) are a valuable, highly-exploited fishery resource in the Laurentian Great Lakes. Here, fishery capture of walleye with internal acoustic transmitters combined with a high reward program provided multiple opportunities to examine photographs and quantify the status of surgical incisions. Walleye (n=926) from reef and river spawning populations in Lake Erie and Lake Huron were implanted with acoustic transmitters during spring spawning events from 2011 to 2016. Incisions were closed...
Categories: Data;
Types: Citation,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Detroit,
Lake Huron,
Lower Maumee,
Plant and animal tagging,
Sandusky,
To determine if invasive annual grasses increased around energy developments after the construction phase, we calculated an invasives index using Landsat TM and ETM+ imagery for a 34-year time period (1985-2018) and assessed trends for 1,755 wind turbines (from the U.S. Wind Turbine Database) installed between 1988 and 2013 in the southern California desert. The index uses the maximum normalized difference vegetation index (NDVI) for early season greenness (January-June), and mean NDVI (July-October) for the later dry season. We estimated the relative cover of invasive annuals each year at turbine locations and control sites and tested for changes before and after each turbine was installed. These data were used...
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service,
Shapefile;
Tags: California,
California South,
Google Earth Engine,
Landsat,
Normalized Difference Vegetation Index,
Fibropapillomatosis (FP) is a tumor disease of marine turtles associated with Chelonid herpesvirus 5 (ChHV5) that has historically been refractory to growth in tissue culture. Here, we show for the first time de novo formation of ChHV5-positive intranuclear inclusions in cultured green turtle cells, which is indicative for active lytic replication of the virus. The minimal requirements to achieve lytic replication in cultured cells included 1) either in-vitro culturing of ChHV5-positive tumor biopsies or organotypic cultures consisting of ChHV5-positive turtle fibroblasts in collagen rafts seeded with ChHV5-negative or -positive turtle keratinocytes and 2) keratinocyte maturation, which occurred naturally in explanted...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Hawaii,
Herpesvirus,
USGS Science Data Catalog (SDC),
electron microscopy,
immunohistochemistry,
To understand the genetic structure of six rare plant species (Acanthomintha ilicifolia, Baccharis vanessae, Chloropyron maritimum ssp. maritimus, Deinandra conjugens, Dicranostegia orcuttiana, Monardella viminea), we obtained samples from known occurrences in San Diego County, prepared and sequenced ddRAD genomic libraries, and developed and analyzed a panel of genetic markers to assess population diversity and divergence. We provide this SNP genotype dataset in Structure format, produced in Stacks v2.0b8, for future monitoring efforts and population genetic analysis. These data support the following publication: Milano, E.R., and Vandergast, A.G., 2018, Population genomic surveys for six rare plant species in...
To describe calling activity of Pseudacris crucifer in relation to temperature, precipitation, and wetland water levels, we programmed an acoustic recorder (Wildlife Acoustics) to sample seasonal amphibian calls remotely at study site SC4DAI2 in the St. Croix National Scenic Riverway from 2008 to 2012. We programmed the recorder to sample for five minutes at the top of every hour of every day from late winter/early spring through late summer. We used the Songscape option in Songscope software to generate annual summaries of all of our acoustic samples from SC4DAI2. These summaries included a median dB level for each prescribed frequency within each recording. Pseudacris crucifer, the spring peeper, inhabited SC4DAI2...
This data release contains three 10-meter resolution GeoTIFFs representing 10-meter (35-foot), 30-meter (100-foot) and 90-meter (300-foot) riparian buffer zones along shorelines, rivers, streams, and other lotic (flowing) water features. The layers are binary, where the value of each cell represents the presence or absence of the buffer zone. In addition, the data release contains shapefile layers that document the extent of corrections that were made to the data to address errors in the stream network (see processing steps section for more details). The methodology combines various fine-scale input layers, including a 1:24k stream network and Chesapeake Bay 1-meter resolution Land Use/Land Cover to approximate...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Chesapeake,
Delaware,
District of Columbia,
Ecology,
Forestry,
Atmospheric deposition of reactive nitrogen (Nr) due to human activities can have measurable effects on ecosystem processing and export of nutrients, groundwater and surface-water quality. Rates of Nr deposition to lower-elevation forests immediately adjacent to the Denver/Boulder urban area, however, have only recently been measured. The focus of this study was to determine the extent of urban and agricultural N pollution transport to the Colorado Front Range. In conjunction with the Network for Urban Atmospheric Nitrogen Chemistry (NUANC) and the National Atmospheric Deposition Program (NADP), we measured wet-plus-dry Nr deposition and evaluated spatial and seasonal variations in N deposition along an elevational...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Colorado,
Ecology,
Environmental Health,
Geochemistry,
Land Use Change,
In 2007, a phase shift from corals to corallimorpharians (CM) was documented at Palmyra Atoll, Line Islands, centered around a shipwreck. Subsequent surveys revealed CM to be overgrowing the reef benthos, including corals and coralline algae, potentially placing coral ecosystems in the atoll at risk. This prompted the U.S. Fish and Wildlife Service, the lead management agency of the atoll, to remove the shipwreck. Subsequent surveys showed reversal of spread of CM around the ship impact site. We explain patterns of spread of the CM in terms of life history and local currents and show with a pilot study that pulverized bleach may be an effective tool to eradicate CM on a local scale. If applied strategically, particularly...
The U.S. Geological Survey (USGS) Data at Risk (DaR) team partnered with the Forest and Rangeland Ecosystem Science Center (FRESC) to preserve and release a subset of their golden eagle telemetry data. In the 1990’s, researchers from what is now FRESC worked with Boise State University (BSU) and collected telemetry and ground observation data that documented the local and migratory movements and behaviors of golden eagles. Over the course of this study 21 golden eagles in the conterminous western US were captured and marked with Argos platform terminal transmitters (PTTs) and tracked by satellite as they moved between breeding and wintering locations (individuals marked with Argos PTTs and tracked by satellite are...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Alaska,
Aquila chrysaetos,
Argos System,
Arizona,
British Columbia,
Data are included for laboratory studies evaluating the thermal biology of several freshwater mussel species and their host fish including dwarf wedgemussel (Alasmidonta heterodon), brook floater (Alasmidonta varicosa), creeper (Strophitus undulatus), eastern elliptio mussel (Elliptio complanata), tesselated darter (Etheostoma olmstedi), and slimy sculpin (Cottus cognatus). Thermal endpoints include critical thermal maximum, temperature preference, oxygen consumption rates, and clearance rates of organisms acclimated to a range of temperature treatments.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Aquatic Biology,
Delaware River,
Ecology,
Susquehanna River,
USGS Science Data Catalog (SDC),
This dataset is part of the U.S. Geological Survey (USGS) Great Lakes Coastal Wetland Restoration Assessment (GLCWRA) initiative. These data represent the flowline network in the Upper Peninsula Restoration Assessment (UPRA). It is attributed with the number of disconnections (e.g., road crossings) between the reach and Lake Ontario. The more road crossings on a flowline the more disconnected that area is from the lake and the less suitable it will be for restoration. These data help identify the condition of hydrologic separation between potential restoration areas and Lake Ontario. Low numbers represent fewer disconnections, such as culverts, between the reach and the water body requiring no flow network modification...
Types: GeoTIFF,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Chippewa,
Ecology,
Great Lakes,
Holocene,
Hydrology,
Transects in backwaters of Navigation Pools 4 and 8 of the Upper Mississippi River (UMR) were established in 1997 to measure sedimentation rates. Annual surveys were conducted from 1997-2002 and then some transects surveyed again in 2017-18. Changes and patterns observed were reported on in 2003 for the 1997-2002 data, and a report summarizing changes and patterns from 1997-2017 will be reported on at this time. Several variables are recorded each survey year and placed into an Excel spreadsheet. The spreadsheets are read with a SAS program to generate a SAS dataset used in SAS programs to determine rates, depth loss, and associations between depth and change through regression.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Erosion,
Mississippi River,
Navigational Pool,
Sedimentation,
USGS Science Data Catalog (SDC),
This release consists of data collected from 26 plots in two national parks over a 19-year period. The data consists of plot-level seed counts for three genera, number of seed traps, live tree basal area, plot area, and climate metrics from the gridmet gridded data set, the daymet gridded data set, the PRISM gridded data set, and two nearby COOP stations.
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: California,
Holocene,
Sequoia-Kings National Park,
Terrestrial surface,
USGS Science Data Catalog (SDC),
The Chesapeake Bay Land Use and Land Cover Database (LULC) facilitates characterization of the landscape and land change for and between discrete time periods. The database was developed by the University of Vermont’s Spatial Analysis Laboratory in cooperation with Chesapeake Conservancy (CC) and U.S. Geological Survey (USGS) as part of a 6-year Cooperative Agreement between Chesapeake Conservancy and the U.S. Environmental Protection Agency (EPA) and a separate Interagency Agreement between the USGS and EPA to provide geospatial support to the Chesapeake Bay Program Office. The database contains one-meter 13-class Land Cover (LC) and 54-class Land Use/Land Cover (LULC) for all counties within or adjacent to the...
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Chesapeake,
Delaware,
District of Columbia,
Land Use Change,
Maryland,
This data set provides biological information from of a captive colony of common vampire bats (wild-caught and born in captivity) that were part of an experimental study on vaccination. It includes results obtained from different assays: RT-PCR, serum neutralization, Rabies direct-fluorescent antibody test, performed periodically during the study (Sep 2018 – May 2020).
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