Filters: Tags: biota (X) > partyWithName: U.S. Geological Survey - ScienceBase (X)
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This dataset represents ease of access to bottomland areas for vegetation treatments. Access may be by road, 4x4 near road, hike in by field crews or requiring overnight camping or raft access. Access is considered for each side of the river separately.
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Arches National Park,
Canyonlands National Park,
Colorado River,
Grand County,
Moab,
This data set shows the extent of the Colorado River Conservation Planning project bottomland area as delineated by topography and vegetation, The bottomland area is subdivided into 1 km polygons measured from the upstream project boundary. Reach breaks were determined by large topographic shifts and/or tributary junctions by John Dohrenwend. Please see the project report for more details.
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Arches National Park,
Canyonlands National Park,
Colorado River,
Grand County,
Moab,
(i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney,...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: USGS Science Data Catalog (SDC),
Unites States of Ameica,
amphibian,
biota,
case definition,
These data were compiled to evaluate the reproductive ecology of Agassiz's desert tortoises (Gopherus agassizzi) in the Sonoran Desert of California using two populations within Joshua Tree National Park, including five reproductive seasons that spanned 20 years (1997-1999, 2015-2016). Compared to their conspecifics inhabiting the Mojave Desert, the reproductive ecology of G. agassizii in the Sonoran Desert is understudied. Climatic variation between the two deserts can affect reproductive ecology, including fecundity and clutch phenology. Mature female tortoises (straight-line carapace length ≥ 20 cm) outfitted with radiotransmitters were located and X-radiographed approximately every 10-14 days during the reproductive...
Categories: Data;
Tags: Agassiz's desert tortoise,
California,
Ecology,
Geography,
Gopherus agassizii,
This is a model showing general habitat diversity, including both the structural and cover type diversity. See Open File Report, Rasmussen and Shafroth, Colorado River Conservation Planning for geoprocessing details.
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Arches National Park,
Canyonlands National Park,
Colorado River,
Grand County,
Moab,
This dataset represents the relative average amount of non-woody cover within 2 ha) of bottomland along the Colorado River from the Colorado state line (San Juan and Grand Counties, Utah) to the southern Canyonlands NP boundary, as of September 2010. Traditional image interpretation cues were used to develop the polygons, such as shape, size, pattern, tone, texture, color, and shadow, from high resolution, true color, aerial imagery (0.3m resolution), acquired for the project. Additional, public available aerial photos (NAIP, 2011) were used to cross-reference cover classes. As with any digital layer, this layer is a representation of what is actually occurring on the ground. Errors are inherent in any interpretation...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Arches National Park,
Canyonlands National Park,
Colorado River,
Grand County,
Moab,
We used the 1981 historical imagery of the Escalante River, Utah in ArcGIS to quantify channel area and average width and quantify woody riparian vegetation cover in two reaches of the river. Reach 1 was approximately 15 river kilometers (rkms) long and located between Sand and Boulder creeks within Grand Staircase Escalante National Monument. Reach 2 was approximately 16 rkms in length, extending from the Glen Canyon National Recreation Area boundary to just upstream of Choprock Canyon. We delineated the extent of active channel. Active channel was defined as the portion of the channel free of vegetation. We also delineated fluvial geomorphic features such as point bars, mid-channel bars, lateral bars and floodplain....
Categories: Data;
Types: Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Escalante River, Utah,
Riparian ecosystems,
Southwestern U.S.,
biota,
channel narrowing,
This dataset represents the variety (unique structural classes: water, bare, herbaceous, short shrubs, medium shrubs, short trees, tall trees) within 1 ha of bottomland areas. Traditional image interpretation cues were used to develop the polygons, such as shape, size, pattern, tone, texture, color, and shadow, from high resolution, true color, aerial imagery (0.3m resolution), acquired for the project. Additional, public available aerial photos (NAIP, 2011) were used to cross-reference cover classes. As with any digital layer, this layer is a representation of what is actually occurring on the ground. Errors are inherent in any interpretation of ground qualities. Due to the "snapshot" nature of the aerial photos,...
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Arches National Park,
Canyonlands National Park,
Colorado River,
Grand County,
Moab,
This dataset is from a restoration field study conducted at seven sites distributed across the southern Colorado Plateau in northern Arizona as part of the RestoreNet dryland restoration field trial network. The data consist of post-experimental restoration treatment (2018-2019) plant density and height measurements along with site precipitation, temperature, and soils data. Plant data were collected through plot monitoring visits distributed throughout the first year following restoration treatments and seeding.
The data document the results of several microbe bioassays performed by the USGS on Phragmites australis plants, including those performed on mature leaves, seedlings, and dead leaf tissues exploration of the literature to find accounts of microbes associated with Phragmites worldwide. For the bioassays, we prepared 162 pure cultures isolated from Phragmites plants in North America along the east coast, Florida, the Gulf of Mexico, and the Great Lakes area, 125 of which were from a previous study, and 38 represent new collections. The DNA sequences used to identify the 37 new collections are included. Microbes were isolated from plants collected from 2015-2018. We performed assays using both North American plant...
These data were compiled for a manuscript in which 1) we develop a water temperature model for the major river segments and tributaries of the Colorado River basin, including the Colorado, Green, Yampa, White, and San Juan rivers; 2) we link modeled water temperature to fish population data to predict the probability native and nonnative species will be common in the future in a warming climate; and 3) assess the degree to which dams create thermal discontinuity in summer in river segments across the western US. Per goal #1, we developed a water temperature model using data spanning 1985-2015 that predicts water temperature every 1 mile (1.6-km) in rivers both now and in the future due to the potential influence...
Vegetation classification model (Veg) and associated metadata for basin A1.
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Colorado,
Rio Blanco,
UAS,
Unmanned Aerial Systems,
biota,
These data were collected as part of a field trial to test the effectiveness of a sylvatic plague vaccine (see Rocke et al., 2017 for details). Vaccine and control plots were selected randomly from the available pairs at each location. Baits containing Rhodamine B, a biomarker, were distributed at each plot. At least 1 week and no more than 2 months post-baiting each year, local collaborators captured, marked, and sampled prairie dogs. Hair and whisker samples were collected from up to 50 unique prairie dogs from each plot each year. Sex, age, weight, and the identity of all current-year and prior-year recaptures were recorded for each captured animal. In the laboratory, hair/whiskers were assessed for the presence...
Categories: Data;
Types: Map Service,
OGC WFS Layer,
OGC WMS Layer,
OGC WMS Service;
Tags: Arizona,
Awapa Plateau,
Buffalo Gap National Grasslands,
Cedar City,
Charles M. Russell National Wildlife Refuge,
This Benthic Invertebrate Community Analysis dataset, a conceptual subgroup of the Lake Erie Ecological Investigations (LEEI) dataset, focuses on the benthic invertebrates sampled at Areas of Concern (AOCs) on Lake Erie. Per the Quality Assurance Project Plan (QAPP), the invertebrate samples were taken from sediments remaining from the sediment analysis. Identification of the invertebrates was completed by the same invertebrate taxonomist for both the 1998-2000 evaluation and 1986-87 historical evaluation (Smith et al. 1994) for increased consistency. Oligochaetes were identified to species if possible, chironomids were identified to genus, as adult specimens are needed for specific identification, and other taxa...
This map shows the channel boundary (2011) of the Colorado River mainstem between the Utah Colorado border and the upper pool of Lake Powell, Utah (146 miles). The channel boundary was mapped from public available NAIP imagery flown on June 28, 2011, when the river flow was 886 m3/s at the Cisco gage. The channel is subdivided into channel types: fast water (main channel, secondary channel), and still water types (backwater, isolated pool and tributary channel).
Categories: Data;
Types: Citation,
Downloadable,
Map Service,
OGC WFS Layer,
OGC WMS Layer,
Shapefile;
Tags: Arches National Park,
Canyonlands National Park,
Colorado River,
Grand County,
Moab,
These data represent simulated soil temperature and moisture conditions for current climate, and for future climate represented by all available climate models at two time periods during the 21st century. These data were used to: 1) quantify the direction and magnitude of expected changes in several measures of soil temperature and soil moisture, including the key variables used to distinguish the regimes used in the R and R categories; 2) assess how these changes will impact the geographic distribution of soil temperature and moisture regimes; and 3) explore the implications for using R and R categories for estimating future ecosystem resilience and resistance.
Digital terrain model (DTM) and associated metadata for basin B1.
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Colorado,
Rio Blanco,
UAS,
Unmanned Aerial Systems,
biota,
Final surface model (SRF) and associated metadata for basin B1.
Categories: Data;
Types: Downloadable,
GeoTIFF,
Map Service,
Raster;
Tags: Colorado,
Rio Blanco,
UAS,
Unmanned Aerial Systems,
biota,
These data represent capture histories for humpback chub (Gila cypha) that spawn in the Little Colorado River (LCR) from 2009-2017. Capture histories pertain to size class (<150mm total length [TL], 150-199mm TL, 200-249mm TL, and >250mm TL) and spatial location (the juvenile chub monitoring [JCM] reach in the Colorado River [63.4-65.0 river miles downstream of Lees Ferry], lower LCR [0-13.56 km upstream of Colorado River confluence], and upper LCR [13.57-17.9 km upstream of Colorado River confluence]).
All gillnet data represented here expand upon vessel operations (OP table) data, all of which are collected by the United States Geological Survey, Great Lakes Science Center and its partners. The Gillnet Tables contain data collected from the research vessel deploying various gear used for gillnet data collection. The database uses sample_type to indicate the gear deployed. The tables relating to Gillnet are: GN_Annulus.csv, GN_Catch.csv, GN_Effort.csv, GN_Fish.csv, GN_L, GN_LF.csv, GN_OP.csv, GN_Prey.csv, GN_Stomach.csv, LMMB_Fish_Prey.csv, and LMMB_Invert_Prey.csv Data Quality: Note that the following data release is a snapshot of the database at the time of release. Some data quality checks are still being...
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